Detailed information NTG1116477

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: EQB47_RS11980
• Genome accession: NZ_LR129844
• Coordinates: 493744..494184 (-)
• Length: 146 a.a.
• NCBI ID: WP_001808911.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 180-15 isolate 180-15
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 488744..499184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB47_RS02700	-	489212..489550 (+)	339	WP_000682119.1	LytTR family DNA-binding domain-containing protein	-
EQB47_RS02705	comE/blpR	489555..490292 (+)	738	WP_001219127.1	response regulator transcription factor	Regulator
EQB47_RS02710	-	490306..491646 (+)	1341	WP_001017622.1	sensor histidine kinase	-
EQB47_RS02715	blpC	491688..491843 (-)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
EQB47_RS02720	-	491900..493261 (-)	1362	WP_001069092.1	bacteriocin secretion accessory protein	-
EQB47_RS11975	comA/nlmT	493272..493760 (-)	489	WP_307774349.1	ATP-binding cassette domain-containing protein	Regulator
EQB47_RS11980	comA/nlmT	493744..494184 (-)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
EQB47_RS11985	comA/nlmT	494174..494899 (-)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
EQB47_RS11990	comA/nlmT	494844..495431 (-)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
EQB47_RS02735	blpI	495713..495910 (+)	198	WP_001093258.1	bacteriocin-like peptide BlpI	-
EQB47_RS02745	cipB	496377..496526 (+)	150	WP_001808912.1	bacteriocin-like peptide BlpO	Regulator
EQB47_RS02750	-	496630..496749 (+)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
EQB47_RS02760	-	497535..497918 (+)	384	WP_000877381.1	hypothetical protein	-
EQB47_RS02765	-	497970..498659 (+)	690	WP_000760526.1	CPBP family intramembrane glutamic endopeptidase	-
EQB47_RS02770	blpZ	498701..498949 (+)	249	WP_000276499.1	immunity protein BlpZ	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16438.75 Da
• Isoelectric Point: 6.8794

>NTDB_id=1116477 EQB47_RS11980 WP_001808911.1 493744..494184(-) (comA/nlmT) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
MSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKSLAPSY

Nucleotide

• Length: 441 bp

>NTDB_id=1116477 EQB47_RS11980 WP_001808911.1 493744..494184(-) (comA/nlmT) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
ATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTCTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAAGTCTTGCGCCGTCATATTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (86-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	71.127	97.26	0.692
comA	Streptococcus mitis NCTC 12261	63.38	97.26	0.616
comA	Streptococcus pneumoniae TIGR4	61.972	97.26	0.603
comA	Streptococcus pneumoniae Rx1	61.972	97.26	0.603
comA	Streptococcus pneumoniae D39	61.972	97.26	0.603
comA	Streptococcus pneumoniae R6	61.972	97.26	0.603
comA	Streptococcus mitis SK321	61.972	97.26	0.603
comA	Streptococcus gordonii str. Challis substr. CH1	59.028	98.63	0.582