Detailed information NTG1116378

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: EQB46_RS10075
• Genome accession: NZ_LR129843
• Coordinates: 1832964..1833425 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250542.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 180-2 isolate 180-2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1827964..1838425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB46_RS10045	-	1828268..1829092 (-)	825	WP_001809383.1	membrane protein insertase YidC	-
EQB46_RS10050	rnpA	1829067..1829438 (-)	372	WP_000739244.1	ribonuclease P protein component	-
EQB46_RS12025	-	1829455..1829586 (-)	132	WP_000768904.1	hypothetical protein	-
EQB46_RS10055	-	1829587..1830777 (-)	1191	WP_000167765.1	acetate kinase	-
EQB46_RS10060	comYH	1830828..1831781 (-)	954	WP_000345099.1	class I SAM-dependent methyltransferase	Machinery gene
EQB46_RS10065	-	1831842..1832436 (-)	595	Protein_1879	class I SAM-dependent methyltransferase	-
EQB46_RS10070	comGG/cglG	1832573..1832986 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQB46_RS10075	comGF/cglF	1832964..1833425 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQB46_RS10080	comGE/cglE	1833388..1833690 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQB46_RS10085	comGD/cglD	1833653..1834057 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQB46_RS10090	comGC/cglC	1834050..1834376 (-)	327	WP_000738636.1	comG operon protein ComGC	Machinery gene
EQB46_RS10095	comGB/cglB	1834378..1835394 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQB46_RS10100	comGA/cglA/cilD	1835342..1836283 (-)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
EQB46_RS10105	-	1836359..1836724 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQB46_RS10110	-	1836875..1837933 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17918.53 Da
• Isoelectric Point: 9.3137

>NTDB_id=1116378 EQB46_RS10075 WP_000250542.1 1832964..1833425(-) (comGF/cglF) [Streptococcus pneumoniae strain 180-2 isolate 180-2]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTNARGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=1116378 EQB46_RS10075 WP_000250542.1 1832964..1833425(-) (comGF/cglF) [Streptococcus pneumoniae strain 180-2 isolate 180-2]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTACTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae D39	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae R6	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae TIGR4	96.078	100	0.961
comGF/cglF	Streptococcus mitis SK321	92.157	100	0.922
comGF/cglF	Streptococcus mitis NCTC 12261	90.85	100	0.909