Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   HMPREF9425_RS08205 Genome accession   NZ_GL831112
Coordinates   1703226..1703975 (-) Length   249 a.a.
NCBI ID   WP_003098133.1    Uniprot ID   -
Organism   Streptococcus vestibularis ATCC 49124     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1698226..1708975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9425_RS08185 (HMPREF9425_1715) - 1698547..1699779 (-) 1233 WP_003098127.1 cysteine desulfurase -
  HMPREF9425_RS08190 (HMPREF9425_1716) sufD 1699833..1701095 (-) 1263 WP_003098130.1 Fe-S cluster assembly protein SufD -
  HMPREF9425_RS08195 (HMPREF9425_1717) sufC 1701132..1701902 (-) 771 WP_002883600.1 Fe-S cluster assembly ATPase SufC -
  HMPREF9425_RS08200 (HMPREF9425_1718) - 1702065..1703222 (-) 1158 WP_003098132.1 glycosyltransferase family 4 protein -
  HMPREF9425_RS08205 (HMPREF9425_1719) mecA 1703226..1703975 (-) 750 WP_003098133.1 adaptor protein MecA Regulator
  HMPREF9425_RS09575 - 1704256..1704579 (+) 324 WP_081448742.1 DUF3021 family protein -
  HMPREF9425_RS10745 (HMPREF9425_1720) - 1704529..1705204 (-) 676 Protein_1676 transposase -
  HMPREF9425_RS08215 (HMPREF9425_1721) - 1705200..1705662 (+) 463 Protein_1677 DUF1697 domain-containing protein -
  HMPREF9425_RS08220 (HMPREF9425_1722) - 1705704..1706444 (-) 741 WP_003098139.1 MerR family transcriptional regulator -
  HMPREF9425_RS10090 - 1706548..1706851 (+) 304 Protein_1679 sodium-dependent transporter -
  HMPREF9425_RS08230 (HMPREF9425_1724) - 1707029..1707595 (+) 567 WP_003098143.1 TetR/AcrR family transcriptional regulator -
  HMPREF9425_RS08235 (HMPREF9425_1725) - 1707780..1708130 (+) 351 WP_003098145.1 hypothetical protein -
  HMPREF9425_RS08240 (HMPREF9425_1726) - 1708140..1708486 (+) 347 Protein_1682 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  HMPREF9425_RS10540 (HMPREF9425_1727) - 1708681..1708812 (+) 132 WP_003098148.1 hypothetical protein -

Sequence


Protein


Download         Length: 249 a.a.        Molecular weight: 29043.63 Da        Isoelectric Point: 4.0182

>NTDB_id=1111772 HMPREF9425_RS08205 WP_003098133.1 1703226..1703975(-) (mecA) [Streptococcus vestibularis ATCC 49124]
MEMKQISETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLGFRVTPRKDRVDVFVTKSDL
KEDLDFNDLSDMDDYSGLSPEEFLKALEGNFMDKGDIEAHHKLEEIEKALEEVDKTMTEPAKEVAEETIREDYTHYVLAF
SDFDQVVTFTQGLKDVPVEGSELYKLGDIYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
SVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=1111772 HMPREF9425_RS08205 WP_003098133.1 1703226..1703975(-) (mecA) [Streptococcus vestibularis ATCC 49124]
ATGGAAATGAAACAAATAAGCGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTCCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTGCCTGATAACT
TTAAAAATAGTGGGATGCTGGGCTTCCGTGTCACGCCACGCAAGGATCGTGTGGATGTTTTTGTGACTAAATCAGACCTT
AAGGAAGACCTTGATTTCAATGATTTGTCAGATATGGATGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAGGGTAACTTTATGGACAAGGGAGATATTGAAGCTCACCATAAGCTCGAAGAGATTGAAAAGGCCTTGGAAGAGGTTG
ATAAGACTATGACAGAGCCGGCTAAGGAAGTGGCTGAGGAAACTATTCGTGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTAACCTTTACGCAAGGTTTGAAGGATGTGCCAGTGGAAGGTTCTGAACTTTATAAACTTGG
TGATATCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGACTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
TCGGTATTACAAGCAACGAAATGGAGCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMD-9

94.378

100

0.944

  mecA Streptococcus thermophilus LMG 18311

93.574

100

0.936

  mecA Streptococcus mutans UA159

59.426

97.992

0.582

  mecA Streptococcus pneumoniae Rx1

45.783

100

0.458

  mecA Streptococcus pneumoniae D39

45.783

100

0.458

  mecA Streptococcus pneumoniae R6

45.783

100

0.458

  mecA Streptococcus pneumoniae TIGR4

45.783

100

0.458


Multiple sequence alignment