Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC/cflB   Type   Machinery gene
Locus tag   ACN076_RS01450 Genome accession   NZ_CP184836
Coordinates   262807..263469 (+) Length   220 a.a.
NCBI ID   WP_420790006.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 257807..268469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS01425 (ACN076_01425) tsf 258176..259216 (+) 1041 WP_064276829.1 translation elongation factor Ts -
  ACN076_RS01430 (ACN076_01430) cysK 259338..260264 (-) 927 WP_153193802.1 cysteine synthase A -
  ACN076_RS01435 (ACN076_01435) - 260361..260804 (-) 444 WP_101786227.1 PH domain-containing protein -
  ACN076_RS01440 (ACN076_01440) - 260820..261455 (-) 636 WP_153193803.1 YigZ family protein -
  ACN076_RS01445 (ACN076_01445) comFA/cflA 261512..262810 (+) 1299 WP_420790005.1 DEAD/DEAH box helicase Machinery gene
  ACN076_RS01450 (ACN076_01450) comFC/cflB 262807..263469 (+) 663 WP_420790006.1 ComF family protein Machinery gene
  ACN076_RS01455 (ACN076_01455) hpf 263549..264097 (+) 549 WP_000599100.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  ACN076_RS01460 (ACN076_01460) - 264233..266206 (+) 1974 WP_420790007.1 DHH family phosphoesterase -
  ACN076_RS01465 (ACN076_01465) rplI 266203..266655 (+) 453 WP_000864214.1 50S ribosomal protein L9 -
  ACN076_RS01470 (ACN076_01470) dnaB 266699..268051 (+) 1353 WP_120770774.1 replicative DNA helicase -
  ACN076_RS01475 (ACN076_01475) - 268053..268319 (+) 267 WP_001278169.1 Veg family protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25284.12 Da        Isoelectric Point: 5.5037

>NTDB_id=1111426 ACN076_RS01450 WP_420790006.1 262807..263469(+) (comFC/cflB) [Streptococcus sp. K0074]
MKCLLCGETMKAVLTFSSLLLLRNDVSCLCLDCDSTFERIGEEYCPNCMKTGLSTKCQDCQFWCKEGVEVSHRAIFTYNQ
AMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVIPLSPDRYADRGFNQVEGLVEAADFAYLDLLEKREERASSS
KSRSERLETESPFFIKSGVTIPKKILLIDDIYTTGTTINRVKKLLEEAGAEDVKTFSLVR

Nucleotide


Download         Length: 663 bp        

>NTDB_id=1111426 ACN076_RS01450 WP_420790006.1 262807..263469(+) (comFC/cflB) [Streptococcus sp. K0074]
GTGAAGTGCTTATTGTGTGGGGAGACTATGAAGGCTGTTTTAACTTTTAGTAGTCTCTTACTTCTGAGGAATGATGTCTC
CTGTCTTTGTTTAGATTGTGATTCTACTTTTGAGAGAATTGGAGAAGAGTACTGTCCAAACTGTATGAAAACAGGATTGT
CAACAAAGTGTCAAGATTGTCAATTTTGGTGTAAAGAAGGAGTTGAAGTCAGTCATAGAGCGATTTTTACTTACAATCAA
GCTATGAAGGATTTTTTCAGTCGGTATAAGTTTGATGGAGACTTCCTTTTAAGAAAAGTGTTCGCTTCATTTTTAAGTGA
GGAGTTAAAAAAGTACAAAGAGTATCAATTTGTTGTAATTCCCCTAAGTCCTGATAGATATGCTGATAGAGGATTTAATC
AGGTTGAAGGTTTAGTTGAAGCAGCAGACTTTGCGTATCTGGATTTATTAGAAAAGAGAGAAGAGCGAGCTAGTTCTTCT
AAAAGTCGCTCAGAGCGTTTGGAGACAGAATCTCCTTTCTTTATTAAAAGTGGAGTCACTATTCCTAAAAAAATCCTACT
TATAGATGATATTTATACTACTGGAACAACTATAAATCGTGTGAAGAAACTGTTGGAAGAAGCTGGTGCTGAAGATGTAA
AAACATTTTCCCTTGTAAGATGA

Domains

Predicted by InterproScan.

Phosphoribosyl transferase domain (Pribosyltran)

(151-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC/cflB Streptococcus mitis NCTC 12261

93.182

100

0.932
  comFC/cflB Streptococcus pneumoniae TIGR4

93.182

100

0.932
  comFC/cflB Streptococcus pneumoniae Rx1

92.727

100

0.927
  comFC/cflB Streptococcus pneumoniae D39

92.727

100

0.927
  comFC/cflB Streptococcus pneumoniae R6

92.727

100

0.927
  comFC/cflB Streptococcus mitis SK321

90.909

100

0.909

Multiple sequence alignment