Detailed information NTG1111382

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACOB85_RS10475
• Genome accession: NZ_CP184834
• Coordinates: 567382..567813 (-)
• Length: 143 a.a.
• NCBI ID: WP_420788408.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain HoVa25
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 562382..572813

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOB85_RS10455 (ACOB85_10455)	coaE	562888..563502 (-)	615	WP_420788405.1	dephospho-CoA kinase	-
ACOB85_RS10460 (ACOB85_10460)	pilD	563503..564372 (-)	870	WP_420788406.1	prepilin peptidase	Machinery gene
ACOB85_RS10465 (ACOB85_10465)	pilC	564437..565660 (-)	1224	WP_017635918.1	type II secretion system F family protein	Machinery gene
ACOB85_RS10470 (ACOB85_10470)	pilB	565684..567369 (-)	1686	WP_420788407.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACOB85_RS10475 (ACOB85_10475)	pilA	567382..567813 (-)	432	WP_420788408.1	pilin	Machinery gene
ACOB85_RS10480 (ACOB85_10480)	nadC	568069..568956 (-)	888	WP_005379983.1	carboxylating nicotinate-nucleotide diphosphorylase	-
ACOB85_RS10485 (ACOB85_10485)	ampD	569049..569600 (+)	552	WP_042521337.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
ACOB85_RS10490 (ACOB85_10490)	pdhR	570006..570773 (+)	768	WP_005379989.1	pyruvate dehydrogenase complex transcriptional repressor PdhR	-

Sequence

Protein

• Length: 143 a.a.
• Molecular weight: 14711.61 Da
• Isoelectric Point: 5.0666

>NTDB_id=1111382 ACOB85_RS10475 WP_420788408.1 567382..567813(-) (pilA) [Vibrio alginolyticus strain HoVa25]
MKNSKQKKQQGFTLIELMIVVGIIGILSALAVPAYKSYVIKTEANAGLATLKSLITPAELYYQENGTSSAAGLSDLGSVA
SANDLGTLTSAIGSGSGAVPTLEFAFGSNSSMTSSDTLTFSRSATEGWSCARAGTVPTEESFK

Nucleotide

• Length: 432 bp

>NTDB_id=1111382 ACOB85_RS10475 WP_420788408.1 567382..567813(-) (pilA) [Vibrio alginolyticus strain HoVa25]
ATGAAAAACAGTAAACAAAAAAAACAACAGGGTTTCACCCTGATTGAATTAATGATTGTGGTTGGGATTATTGGAATTCT
AAGCGCTTTGGCAGTACCTGCATATAAGAGCTATGTAATAAAAACAGAAGCTAACGCAGGGCTTGCTACGTTAAAGTCCC
TAATTACTCCGGCTGAACTCTATTATCAAGAAAATGGAACGAGCTCGGCTGCTGGTCTTTCTGATTTAGGTTCAGTAGCT
TCAGCTAACGATTTAGGCACACTAACATCAGCAATTGGATCTGGTTCAGGTGCGGTACCAACTCTAGAATTTGCTTTTGG
TTCAAATAGCTCAATGACCTCGAGTGATACTTTAACTTTCTCTCGTAGTGCAACCGAAGGTTGGTCTTGTGCTCGTGCTG
GTACAGTCCCAACTGAGGAAAGCTTCAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-31)

• Pilin (bacterial filament) (Pilin) (41-138)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Vibrio parahaemolyticus RIMD 2210633	60.769	90.909	0.552
pilA	Pseudomonas aeruginosa PAK	39.552	93.706	0.371