Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACNR93_RS09195 Genome accession   NZ_CP184736
Coordinates   1874165..1875418 (+) Length   417 a.a.
NCBI ID   WP_420543640.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1869165..1880418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS09170 (ACNR93_09170) - 1870049..1872631 (+) 2583 WP_420543639.1 YfhO family protein -
  ACNR93_RS09190 (ACNR93_09190) rlmH 1873473..1873952 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACNR93_RS09195 (ACNR93_09195) htrA 1874165..1875418 (+) 1254 WP_420543640.1 S1C family serine protease Regulator
  ACNR93_RS09200 (ACNR93_09200) spo0J 1875479..1876261 (+) 783 WP_420543641.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 417 a.a.        Molecular weight: 43238.09 Da        Isoelectric Point: 4.4532

>NTDB_id=1110983 ACNR93_RS09195 WP_420543640.1 1874165..1875418(+) (htrA) [Streptococcus equinus strain NM-2-29]
MKKVNFPKVKSKKILKPLSVILIGFIGGVAGTLLILNMAGISINNVSGSSTKTTTSKVSYSNSNDTTKAVSKVQDAVVSV
INYQSNTSSNDLYAQLFGDNANSNNSSSDDDLNISSEGSGVIYKKDGNSAYVVTNNHVVDGAEQLEIMLSDGTKVVGELV
GADTYSDIAVVKIASDKVSTVAEFADSDKITVGETAIAIGSPLGTDYANSVTQGIVSSLSRTVTMTNDDGETISTNAIQT
DAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVKIINQLEENGKVIRPALGITMANLSDLST
VSISHLNIPTSVTGGVVVASVQSGMPAEGTLERYDVITAIDGEEVNSITDLQSILYGHSTGDSVKVTFYRGTTKKTETIK
LTKTTQDLSSSSNSSNQ

Nucleotide


Download         Length: 1254 bp        

>NTDB_id=1110983 ACNR93_RS09195 WP_420543640.1 1874165..1875418(+) (htrA) [Streptococcus equinus strain NM-2-29]
ATGAAAAAAGTCAATTTTCCAAAAGTTAAATCAAAAAAAATTCTCAAGCCGCTGTCTGTCATTTTAATCGGATTCATCGG
AGGTGTAGCTGGGACGCTACTGATTTTAAATATGGCTGGCATTTCGATAAATAACGTTAGCGGTTCAAGTACTAAAACAA
CTACAAGTAAAGTAAGTTATTCAAATTCTAATGATACGACAAAAGCCGTTTCAAAAGTTCAAGACGCTGTCGTATCCGTT
ATTAATTATCAATCAAATACTTCATCAAATGATCTGTACGCTCAATTATTTGGTGATAATGCAAATAGCAACAATTCATC
GTCTGATGATGATTTAAACATCTCTAGCGAAGGTTCTGGTGTTATTTACAAAAAAGATGGAAATTCTGCCTACGTTGTAA
CAAATAACCACGTCGTTGACGGCGCTGAACAGCTCGAAATCATGCTATCTGATGGTACAAAAGTCGTTGGAGAATTAGTC
GGAGCTGATACTTATTCAGATATCGCTGTTGTCAAAATTGCTTCTGATAAAGTTTCTACCGTTGCCGAATTTGCTGACTC
AGATAAAATTACCGTCGGGGAAACAGCTATTGCCATTGGTAGCCCGCTTGGAACTGACTACGCAAACTCTGTAACACAAG
GGATTGTCTCAAGTCTAAGCCGTACAGTAACAATGACTAATGACGATGGCGAAACTATCTCAACAAATGCTATCCAAACC
GATGCCGCTATTAACCCAGGTAACTCTGGAGGTGCTTTGATTAATATCGAAGGACAAGTTATCGGTATCAACTCAAGTAA
AATTTCTTCAACATCTAGTTCAGGTGAGTCTGTAGAAGGTATGGGATTTGCCATTCCATCTAACGATGTCGTCAAAATCA
TTAATCAATTGGAAGAAAACGGAAAAGTTATTCGTCCAGCACTTGGTATCACAATGGCTAACTTAAGCGATCTCTCAACT
GTATCTATTAGCCACCTCAACATCCCAACTAGTGTTACTGGAGGAGTTGTTGTAGCCTCAGTACAATCAGGTATGCCTGC
TGAAGGAACTCTTGAAAGATACGATGTCATCACAGCTATTGATGGTGAAGAAGTTAACTCAATCACAGACCTTCAAAGTA
TTCTTTACGGACACTCAACTGGAGACTCTGTCAAAGTTACTTTCTACCGCGGTACAACTAAGAAAACTGAAACAATTAAA
CTAACTAAAACAACTCAAGACCTCTCTTCTTCATCAAATTCATCAAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.356

96.882

0.623

  htrA Streptococcus gordonii str. Challis substr. CH1

60.349

96.163

0.58

  htrA Streptococcus mitis NCTC 12261

58.765

97.122

0.571

  htrA Streptococcus pneumoniae TIGR4

59.148

95.683

0.566

  htrA Streptococcus pneumoniae Rx1

59.148

95.683

0.566

  htrA Streptococcus pneumoniae D39

59.148

95.683

0.566

  htrA Streptococcus pneumoniae R6

59.148

95.683

0.566


Multiple sequence alignment