Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACNR93_RS09200 Genome accession   NZ_CP184736
Coordinates   1875479..1876261 (+) Length   260 a.a.
NCBI ID   WP_420543641.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1870479..1881261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS09190 (ACNR93_09190) rlmH 1873473..1873952 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACNR93_RS09195 (ACNR93_09195) htrA 1874165..1875418 (+) 1254 WP_420543640.1 S1C family serine protease Regulator
  ACNR93_RS09200 (ACNR93_09200) spo0J 1875479..1876261 (+) 783 WP_420543641.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 260 a.a.        Molecular weight: 29830.59 Da        Isoelectric Point: 10.0710

>NTDB_id=1110984 ACNR93_RS09200 WP_420543641.1 1875479..1876261(+) (spo0J) [Streptococcus equinus strain NM-2-29]
MTETLNLINIDDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGERRLKASKMAGLSKIPAIIK
EISNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHEELAQFMGKSRPYITNCLRLLNLPSAISKAVEQGQLSQG
HARVLLTLKNEKEQEKWYQKVITEEISVRKLEELVKKTKPAKKSSKKNKKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG
DLQLHFQSEEDFNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=1110984 ACNR93_RS09200 WP_420543641.1 1875479..1876261(+) (spo0J) [Streptococcus equinus strain NM-2-29]
ATGACTGAGACACTTAACCTAATAAATATTGACGATATTTCTCCAAATCCTTACCAACCACGCTTAGAATTTAAACAAGA
AGAATTAGAAGAGCTATCTCGATCAATCAAAGCTAATGGCCTTATTCAGCCCATTATCGTTCGAAAATCTGCTATCTTTG
GATACGAGCTTATAGCAGGAGAGAGACGTCTTAAAGCTTCTAAAATGGCTGGTTTGAGCAAAATTCCAGCGATTATCAAA
GAAATTTCTAATAAAGAAAGTATGCAACTGGCTATTGTCGAAAATTTGCAACGTTCAGACCTTAATCCCATCGAGGAAGC
AAAAGCCTATCAGCAATTATTAGACAGAAATCAGATGACACACGAAGAATTAGCTCAATTCATGGGAAAATCTCGTCCTT
ACATCACCAATTGCTTACGATTATTGAATTTACCAAGTGCCATTTCTAAAGCCGTCGAGCAAGGGCAACTATCCCAAGGT
CACGCGCGCGTGCTTCTCACATTAAAAAATGAAAAAGAACAAGAGAAGTGGTATCAAAAAGTCATTACTGAAGAAATTAG
CGTCCGAAAACTGGAAGAACTGGTCAAAAAAACTAAACCCGCTAAAAAATCTTCAAAAAAAAATAAAAAAAATATTTTTA
TTCGTCATCAAGAAGAAGAACTATCAAAATTATTAGGAGTCCCAGTTAGCTTATCCCTTGCCAAATCAGGCTTCAAGGGA
GATTTGCAATTGCATTTTCAGAGCGAAGAAGACTTTAACAGAATTATCAACAGGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.154

100

0.612


Multiple sequence alignment