Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ACNR93_RS08555 Genome accession   NZ_CP184736
Coordinates   1732564..1734063 (-) Length   499 a.a.
NCBI ID   WP_134775673.1    Uniprot ID   A0A6G8HZ78
Organism   Streptococcus equinus strain NM-2-29     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1727564..1739063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS08535 (ACNR93_08535) - 1728250..1729440 (-) 1191 WP_021143227.1 argininosuccinate synthase -
  ACNR93_RS08540 (ACNR93_08540) amiF 1729640..1730569 (-) 930 WP_420543582.1 ATP-binding cassette domain-containing protein Regulator
  ACNR93_RS08545 (ACNR93_08545) amiE 1730562..1731629 (-) 1068 WP_015695757.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS08550 (ACNR93_08550) amiD 1731638..1732564 (-) 927 WP_015695758.1 oligopeptide ABC transporter permease OppC Regulator
  ACNR93_RS08555 (ACNR93_08555) amiC 1732564..1734063 (-) 1500 WP_134775673.1 ABC transporter permease Regulator
  ACNR93_RS08560 (ACNR93_08560) amiA 1734124..1736097 (-) 1974 WP_420543583.1 peptide ABC transporter substrate-binding protein Regulator
  ACNR93_RS08565 (ACNR93_08565) - 1736370..1737536 (-) 1167 WP_039691319.1 CynX/NimT family MFS transporter -

Sequence

Protein


Download         Length: 499 a.a.        Molecular weight: 55542.83 Da        Isoelectric Point: 9.8507

>NTDB_id=1110976 ACNR93_RS08555 WP_134775673.1 1732564..1734063(-) (amiC) [Streptococcus equinus strain NM-2-29]
MKKYVFNRILRSLVSIFLVTTLSYAIVFSLVPRKLIFKQDPNYTKIAVTHDKKVDYENTVYERMGYIDYLNTKELVNGSK
KIDKSVTDKGTVADKQLYQNYLDSISGKWKLEKFDSGKYFATREIPIYERLWKFYSNLIVIDHPWKINDPENPKLERYVR
FENDPAVGPALVGSGTQHKYLIYFNSKFPFIHQNIITFNLGISYPSFANIPVLQVITQGQGKTLAQEVTFPTGVTKVSSV
DIYTRSYKSPSKADARDIANYGKGDAYTATQNNYTEPSMISNSLKAGIVGILIAYALGLPIGLLMARYKDGIFDRFSTAT
VTFMLAMPSIATIYVIRFIGANVFGLPDTFPLLGAGDIRSYVMPAIILGILSTPGIVVWFRRYLVDLQGSDFVRFARAKG
LSETEICQDHLFKHAMVPIVNGIPGAIVGTIAGATLTEKIFAFPGMGKMLIDAIASANNTMVIGLVFIFAVLAIFALLVG
DILMTVLDPRIKLSSKGGK

Nucleotide


Download         Length: 1500 bp        

>NTDB_id=1110976 ACNR93_RS08555 WP_134775673.1 1732564..1734063(-) (amiC) [Streptococcus equinus strain NM-2-29]
ATGAAAAAATATGTTTTTAATCGAATATTAAGATCCTTAGTTTCTATATTCTTGGTGACAACATTATCATATGCGATTGT
ATTTTCGCTTGTCCCTCGAAAACTAATTTTCAAGCAAGACCCTAATTACACCAAAATCGCTGTCACACATGATAAAAAAG
TTGACTATGAGAACACTGTTTATGAGCGCATGGGTTATATCGACTACCTTAATACTAAAGAACTTGTAAATGGTAGCAAA
AAAATCGACAAATCGGTGACTGACAAGGGAACAGTAGCTGATAAGCAATTGTATCAAAACTATCTTGATTCTATTTCTGG
CAAATGGAAGTTAGAAAAATTTGATTCTGGAAAATATTTTGCAACACGTGAAATTCCAATTTATGAACGTCTTTGGAAAT
TTTATTCTAATTTGATTGTGATTGATCATCCGTGGAAAATTAATGATCCAGAAAATCCAAAATTAGAGCGCTATGTACGT
TTTGAAAATGATCCCGCCGTTGGACCAGCGCTTGTTGGATCAGGGACACAGCATAAATATCTCATTTATTTTAATAGCAA
GTTCCCATTTATTCATCAAAATATTATTACTTTCAATTTAGGTATTTCATATCCAAGCTTTGCTAATATTCCTGTATTAC
AGGTTATCACTCAGGGCCAAGGGAAAACTTTAGCACAAGAAGTGACATTCCCAACAGGAGTAACTAAAGTATCATCAGTT
GATATTTATACGCGTTCATATAAATCACCAAGTAAGGCTGATGCTCGTGATATTGCAAATTATGGTAAGGGTGATGCCTA
CACTGCCACTCAAAATAATTACACCGAACCTTCAATGATTTCAAATTCATTGAAAGCAGGTATTGTCGGAATTTTAATTG
CCTATGCTCTTGGTTTGCCAATAGGTCTTTTAATGGCACGTTATAAAGATGGTATTTTTGACCGCTTTTCAACAGCAACT
GTCACTTTCATGCTGGCTATGCCAAGTATTGCTACTATTTACGTGATTCGTTTTATTGGTGCTAATGTGTTTGGTCTACC
AGATACATTTCCATTATTAGGTGCTGGAGATATACGTTCTTACGTAATGCCTGCTATCATTTTGGGAATTTTGAGTACAC
CAGGTATTGTAGTTTGGTTCCGTCGCTATTTGGTGGATTTGCAAGGTAGTGATTTTGTTCGATTTGCGCGTGCAAAAGGT
TTGTCTGAAACAGAAATCTGTCAAGATCATTTGTTTAAACATGCTATGGTTCCAATTGTGAATGGCATTCCTGGAGCAAT
CGTGGGAACTATTGCTGGGGCAACTCTGACTGAGAAAATTTTTGCTTTTCCAGGTATGGGGAAAATGTTGATTGATGCTA
TTGCTTCTGCTAATAATACAATGGTTATCGGCTTAGTATTTATTTTTGCGGTCTTAGCAATTTTTGCACTTCTTGTAGGA
GATATTTTGATGACTGTTCTTGACCCACGTATAAAACTATCATCAAAAGGAGGTAAATGA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8HZ78

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

60.2

100

0.603
  amiC Streptococcus thermophilus LMG 18311

59.6

100

0.597
  amiC Streptococcus thermophilus LMD-9

59.2

100

0.593

Multiple sequence alignment