Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ACNR93_RS08545 Genome accession   NZ_CP184736
Coordinates   1730562..1731629 (-) Length   355 a.a.
NCBI ID   WP_015695757.1    Uniprot ID   A0A6G8HZL6
Organism   Streptococcus equinus strain NM-2-29     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1725562..1736629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS08525 (ACNR93_08525) rnpA 1725921..1726280 (-) 360 WP_024344384.1 ribonuclease P protein component -
  ACNR93_RS08530 (ACNR93_08530) argH 1726432..1727814 (-) 1383 WP_134775670.1 argininosuccinate lyase -
  ACNR93_RS08535 (ACNR93_08535) - 1728250..1729440 (-) 1191 WP_021143227.1 argininosuccinate synthase -
  ACNR93_RS08540 (ACNR93_08540) amiF 1729640..1730569 (-) 930 WP_420543582.1 ATP-binding cassette domain-containing protein Regulator
  ACNR93_RS08545 (ACNR93_08545) amiE 1730562..1731629 (-) 1068 WP_015695757.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS08550 (ACNR93_08550) amiD 1731638..1732564 (-) 927 WP_015695758.1 oligopeptide ABC transporter permease OppC Regulator
  ACNR93_RS08555 (ACNR93_08555) amiC 1732564..1734063 (-) 1500 WP_134775673.1 ABC transporter permease Regulator
  ACNR93_RS08560 (ACNR93_08560) amiA 1734124..1736097 (-) 1974 WP_420543583.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39667.61 Da        Isoelectric Point: 6.0022

>NTDB_id=1110974 ACNR93_RS08545 WP_015695757.1 1730562..1731629(-) (amiE) [Streptococcus equinus strain NM-2-29]
MTDKNKVLSVRDMVVEFEVRDRILTAIRNISIDLYEGEVLAVVGESGSGKSVLTKTFTGMLESNGRIAKGSINYRGQDLT
KIKSNSEWGKIRGGKIATIFQDPMTSLDPIQTIGSQITEAIIKHQGASKSEAKELAIDYMKKVGIPEAKKRFNEYPFQYS
GGMRQRIVIAIALACKPDILICDEPTTALDVTIQAQIINLLKELQREYNFTTIFITHDLGVVASIADKVAVMYAGDIVEY
GTVEEIFYDPKHPYTWSLLSSLPQLADDNGVLFSIPGTPPSLYTPIKGDAFAPRSRYAMKIDFEEDVPKFPVTETHWAKT
WLLHPDAPKVEKPEVIQNLHQKISRKMINLEEGND

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=1110974 ACNR93_RS08545 WP_015695757.1 1730562..1731629(-) (amiE) [Streptococcus equinus strain NM-2-29]
ATGACTGATAAAAATAAAGTTTTAAGTGTTCGAGATATGGTTGTTGAATTTGAAGTTCGTGATCGTATTTTAACAGCTAT
TCGTAATATTTCAATTGATCTTTATGAAGGTGAAGTTCTTGCTGTTGTAGGTGAGTCTGGTAGTGGAAAATCAGTCCTAA
CGAAAACATTCACAGGAATGTTGGAATCAAATGGACGTATCGCTAAGGGATCTATTAATTATCGCGGTCAAGATTTAACA
AAAATTAAGTCAAATTCAGAATGGGGAAAAATTCGTGGTGGTAAGATTGCGACAATTTTCCAAGATCCAATGACGAGTCT
TGATCCAATTCAAACGATTGGTAGCCAAATTACAGAAGCTATTATCAAACATCAAGGAGCAAGTAAGAGTGAAGCTAAGG
AATTAGCGATTGATTACATGAAAAAAGTAGGCATTCCTGAAGCGAAGAAACGTTTTAATGAATATCCATTTCAGTATTCA
GGTGGGATGCGTCAACGTATTGTCATTGCGATTGCTTTAGCTTGTAAGCCAGATATCTTGATTTGTGACGAGCCTACGAC
CGCCCTTGATGTAACAATTCAGGCTCAAATTATTAATCTTTTAAAGGAGTTGCAAAGAGAATATAATTTCACAACTATTT
TTATCACACACGATTTAGGTGTGGTTGCAAGTATTGCTGATAAGGTAGCTGTCATGTATGCGGGTGATATTGTTGAGTAT
GGAACAGTTGAAGAGATTTTTTATGATCCTAAACATCCTTATACTTGGAGTTTATTATCAAGCCTTCCTCAATTGGCTGA
TGACAATGGTGTTCTCTTTTCGATTCCAGGGACGCCGCCTTCATTGTATACACCTATTAAAGGTGACGCTTTTGCTCCTC
GTTCTCGCTATGCAATGAAAATTGATTTTGAAGAGGATGTTCCTAAATTTCCTGTAACCGAAACTCACTGGGCAAAAACA
TGGTTACTTCATCCAGATGCACCGAAGGTTGAAAAACCAGAGGTCATTCAAAATCTACATCAAAAGATTTCTCGAAAAAT
GATTAACTTGGAGGAAGGAAATGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G8HZL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

78.711

100

0.792

  amiE Streptococcus thermophilus LMG 18311

77.591

100

0.78

  amiE Streptococcus thermophilus LMD-9

77.591

100

0.78

  oppD Streptococcus mutans UA159

55.114

99.155

0.546


Multiple sequence alignment