Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   ACNM63_RS11840 Genome accession   NZ_CP183191
Coordinates   2465969..2466346 (-) Length   125 a.a.
NCBI ID   WP_017418138.1    Uniprot ID   -
Organism   Bacillus velezensis strain QC02     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2460969..2471346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNM63_RS11800 (ACNM63_11800) - 2461466..2462260 (+) 795 WP_014418368.1 YqhG family protein -
  ACNM63_RS11805 (ACNM63_11805) sinI 2462437..2462610 (+) 174 WP_014418369.1 anti-repressor SinI Regulator
  ACNM63_RS11810 (ACNM63_11810) sinR 2462644..2462979 (+) 336 WP_003153104.1 transcriptional regulator SinR Regulator
  ACNM63_RS11815 (ACNM63_11815) tasA 2463027..2463812 (-) 786 WP_007408329.1 biofilm matrix protein TasA -
  ACNM63_RS11820 (ACNM63_11820) sipW 2463877..2464461 (-) 585 WP_012117977.1 signal peptidase I SipW -
  ACNM63_RS11825 (ACNM63_11825) tapA 2464433..2465104 (-) 672 WP_014418371.1 amyloid fiber anchoring/assembly protein TapA -
  ACNM63_RS11830 (ACNM63_11830) - 2465363..2465692 (+) 330 WP_012117979.1 DUF3889 domain-containing protein -
  ACNM63_RS11835 (ACNM63_11835) - 2465733..2465912 (-) 180 WP_003153093.1 YqzE family protein -
  ACNM63_RS11840 (ACNM63_11840) comGG 2465969..2466346 (-) 378 WP_017418138.1 competence type IV pilus minor pilin ComGG Machinery gene
  ACNM63_RS11845 (ACNM63_11845) comGF 2466347..2466742 (-) 396 WP_025649850.1 competence type IV pilus minor pilin ComGF -
  ACNM63_RS11850 (ACNM63_11850) comGE 2466756..2467070 (-) 315 WP_017418140.1 competence type IV pilus minor pilin ComGE Machinery gene
  ACNM63_RS11855 (ACNM63_11855) comGD 2467054..2467491 (-) 438 WP_095061019.1 competence type IV pilus minor pilin ComGD Machinery gene
  ACNM63_RS11860 (ACNM63_11860) comGC 2467481..2467789 (-) 309 WP_014418376.1 competence type IV pilus major pilin ComGC Machinery gene
  ACNM63_RS11865 (ACNM63_11865) comGB 2467794..2468831 (-) 1038 WP_053284924.1 competence type IV pilus assembly protein ComGB Machinery gene
  ACNM63_RS11870 (ACNM63_11870) comGA 2468818..2469888 (-) 1071 WP_014418378.1 competence type IV pilus ATPase ComGA Machinery gene
  ACNM63_RS11875 (ACNM63_11875) - 2470081..2471031 (-) 951 WP_014418379.1 magnesium transporter CorA family protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14125.01 Da        Isoelectric Point: 9.7165

>NTDB_id=1104379 ACNM63_RS11840 WP_017418138.1 2465969..2466346(-) (comGG) [Bacillus velezensis strain QC02]
MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGALLSSRHMTQGQKGQTGTQRFPYGTVS
FHITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLIQWTEV

Nucleotide


Download         Length: 378 bp        

>NTDB_id=1104379 ACNM63_RS11840 WP_017418138.1 2465969..2466346(-) (comGG) [Bacillus velezensis strain QC02]
ATGTACAAATCTGACGGTTTTATATATCCCGCGGTTCTGTTTGTTTCTGCCGCAGTTTTACTTGTCATCAGCTATACTTC
ATCTGATTTCATCACCCGAAAAACATTTGCAAAAGAGGCCGGGGAGTACTGGATCGGAGAGAACCTGCTCCAAAACGGCG
CGCTGCTGTCAAGCCGCCATATGACACAGGGACAAAAGGGCCAAACTGGTACACAGCGTTTTCCGTACGGCACCGTTTCT
TTTCACATCACCGGGAGTGATCGAAGGGAAACGGTTCAGGTTACAATTCAGGCGGAAACCACGACAGGCACGAGACGGGA
GGCTCACCTTTTGTTCGATCAGAAGAAGAAACAGCTGATTCAATGGACGGAAGTATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

51.613

99.2

0.512

Multiple sequence alignment