Detailed information NTG1104381

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ACNM63_RS11855
• Genome accession: NZ_CP183191
• Coordinates: 2467054..2467491 (-)
• Length: 145 a.a.
• NCBI ID: WP_095061019.1
• Uniprot ID: A0AAP4DGY0
• Organism: Bacillus velezensis strain QC02
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2462054..2472491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNM63_RS11805 (ACNM63_11805)	sinI	2462437..2462610 (+)	174	WP_014418369.1	anti-repressor SinI	Regulator
ACNM63_RS11810 (ACNM63_11810)	sinR	2462644..2462979 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
ACNM63_RS11815 (ACNM63_11815)	tasA	2463027..2463812 (-)	786	WP_007408329.1	biofilm matrix protein TasA	-
ACNM63_RS11820 (ACNM63_11820)	sipW	2463877..2464461 (-)	585	WP_012117977.1	signal peptidase I SipW	-
ACNM63_RS11825 (ACNM63_11825)	tapA	2464433..2465104 (-)	672	WP_014418371.1	amyloid fiber anchoring/assembly protein TapA	-
ACNM63_RS11830 (ACNM63_11830)	-	2465363..2465692 (+)	330	WP_012117979.1	DUF3889 domain-containing protein	-
ACNM63_RS11835 (ACNM63_11835)	-	2465733..2465912 (-)	180	WP_003153093.1	YqzE family protein	-
ACNM63_RS11840 (ACNM63_11840)	comGG	2465969..2466346 (-)	378	WP_017418138.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACNM63_RS11845 (ACNM63_11845)	comGF	2466347..2466742 (-)	396	WP_025649850.1	competence type IV pilus minor pilin ComGF	-
ACNM63_RS11850 (ACNM63_11850)	comGE	2466756..2467070 (-)	315	WP_017418140.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACNM63_RS11855 (ACNM63_11855)	comGD	2467054..2467491 (-)	438	WP_095061019.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACNM63_RS11860 (ACNM63_11860)	comGC	2467481..2467789 (-)	309	WP_014418376.1	competence type IV pilus major pilin ComGC	Machinery gene
ACNM63_RS11865 (ACNM63_11865)	comGB	2467794..2468831 (-)	1038	WP_053284924.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACNM63_RS11870 (ACNM63_11870)	comGA	2468818..2469888 (-)	1071	WP_014418378.1	competence type IV pilus ATPase ComGA	Machinery gene
ACNM63_RS11875 (ACNM63_11875)	-	2470081..2471031 (-)	951	WP_014418379.1	magnesium transporter CorA family protein	-
ACNM63_RS11880 (ACNM63_11880)	-	2471177..2472478 (+)	1302	WP_029973873.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16282.81 Da
• Isoelectric Point: 10.1850

>NTDB_id=1104381 ACNM63_RS11855 WP_095061019.1 2467054..2467491(-) (comGD) [Bacillus velezensis strain QC02]
MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPVCTHLVVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=1104381 ACNM63_RS11855 WP_095061019.1 2467054..2467491(-) (comGD) [Bacillus velezensis strain QC02]
TTGAACAATAACAGGCGGACAGAAAATGGGTTTACCCTTCTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTGCACCCACCTTGTCGTGCGGCAAAAAACAGAACAGCTCCAAAAAGATA
TTCAGCTTGCTCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAGGCGGAAGGATTGTCGAGCGTTCTTTTGATTCGCTTCACATTACGCTTGTGACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATCACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	54.795	100	0.552