Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACNQFN_RS07270 | Genome accession | NZ_CP183038 |
| Coordinates | 1510457..1510969 (+) | Length | 170 a.a. |
| NCBI ID | WP_418648401.1 | Uniprot ID | - |
| Organism | Thauera butanivorans strain TB | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1505457..1515969
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNQFN_RS07255 (ACNQFN_07255) | aroG | 1506879..1507964 (+) | 1086 | WP_068635632.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| ACNQFN_RS07260 (ACNQFN_07260) | gabD | 1508016..1509473 (+) | 1458 | WP_068635610.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| ACNQFN_RS07265 (ACNQFN_07265) | - | 1509562..1509924 (-) | 363 | WP_068635611.1 | tetratricopeptide repeat protein | - |
| ACNQFN_RS07270 (ACNQFN_07270) | pilA | 1510457..1510969 (+) | 513 | WP_418648401.1 | pilin | Machinery gene |
| ACNQFN_RS07275 (ACNQFN_07275) | - | 1511151..1511363 (-) | 213 | WP_418648402.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| ACNQFN_RS07280 (ACNQFN_07280) | - | 1511362..1512234 (+) | 873 | WP_418648403.1 | hypothetical protein | - |
| ACNQFN_RS07285 (ACNQFN_07285) | - | 1512419..1513009 (-) | 591 | WP_418648404.1 | Uma2 family endonuclease | - |
| ACNQFN_RS07290 (ACNQFN_07290) | - | 1513107..1514000 (-) | 894 | WP_418648405.1 | ketopantoate reductase family protein | - |
| ACNQFN_RS07295 (ACNQFN_07295) | - | 1514055..1515314 (-) | 1260 | WP_418648406.1 | Hsp70 family protein | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 17360.76 Da Isoelectric Point: 4.3774
>NTDB_id=1103732 ACNQFN_RS07270 WP_418648401.1 1510457..1510969(+) (pilA) [Thauera butanivorans strain TB]
MKGKIMKKAQQGFTLIELMIVVAIVGILAAVALPAYQDYTKRARVTEGISLATSAKTAIAENAASAVEYDAGWTAPTATD
NVLDVAIDNTTGEITIEYAAPVAATGSNELILSPFTGAPGSEAALPDSTTAYTPPTDGIQWQCLAAGATAKVTGATVGTL
EAKLAPSNCR
MKGKIMKKAQQGFTLIELMIVVAIVGILAAVALPAYQDYTKRARVTEGISLATSAKTAIAENAASAVEYDAGWTAPTATD
NVLDVAIDNTTGEITIEYAAPVAATGSNELILSPFTGAPGSEAALPDSTTAYTPPTDGIQWQCLAAGATAKVTGATVGTL
EAKLAPSNCR
Nucleotide
Download Length: 513 bp
>NTDB_id=1103732 ACNQFN_RS07270 WP_418648401.1 1510457..1510969(+) (pilA) [Thauera butanivorans strain TB]
ATGAAGGGGAAAATCATGAAAAAGGCTCAACAGGGTTTCACGCTGATCGAACTGATGATCGTCGTGGCTATCGTCGGCAT
TCTGGCAGCTGTGGCGTTGCCGGCGTATCAGGACTATACGAAGCGCGCGAGAGTAACGGAAGGCATCTCGCTGGCGACTT
CTGCAAAGACGGCTATTGCTGAAAATGCGGCGAGTGCGGTTGAATATGACGCTGGCTGGACCGCTCCCACCGCGACTGAC
AATGTACTGGACGTTGCGATCGATAATACTACCGGGGAAATTACGATTGAATACGCCGCACCAGTTGCTGCTACTGGTAG
CAATGAATTGATCCTCTCTCCCTTTACCGGCGCACCTGGCTCAGAAGCAGCACTGCCTGACTCTACAACAGCTTACACTC
CGCCTACTGATGGCATCCAATGGCAATGCTTGGCTGCCGGCGCTACTGCAAAAGTTACTGGAGCAACAGTAGGCACTCTT
GAAGCCAAACTGGCGCCTTCCAACTGCCGTTAA
ATGAAGGGGAAAATCATGAAAAAGGCTCAACAGGGTTTCACGCTGATCGAACTGATGATCGTCGTGGCTATCGTCGGCAT
TCTGGCAGCTGTGGCGTTGCCGGCGTATCAGGACTATACGAAGCGCGCGAGAGTAACGGAAGGCATCTCGCTGGCGACTT
CTGCAAAGACGGCTATTGCTGAAAATGCGGCGAGTGCGGTTGAATATGACGCTGGCTGGACCGCTCCCACCGCGACTGAC
AATGTACTGGACGTTGCGATCGATAATACTACCGGGGAAATTACGATTGAATACGCCGCACCAGTTGCTGCTACTGGTAG
CAATGAATTGATCCTCTCTCCCTTTACCGGCGCACCTGGCTCAGAAGCAGCACTGCCTGACTCTACAACAGCTTACACTC
CGCCTACTGATGGCATCCAATGGCAATGCTTGGCTGCCGGCGCTACTGCAAAAGTTACTGGAGCAACAGTAGGCACTCTT
GAAGCCAAACTGGCGCCTTCCAACTGCCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
47.701 |
100 |
0.488 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
45.783 |
97.647 |
0.447 |
| pilA2 | Legionella pneumophila str. Paris |
45.181 |
97.647 |
0.441 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.946 |
100 |
0.441 |
| comP | Acinetobacter baylyi ADP1 |
37.349 |
97.647 |
0.365 |