Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACGHT2_RS10940 Genome accession   NZ_AP031455
Coordinates   2091432..2092697 (+) Length   421 a.a.
NCBI ID   WP_058692592.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2086432..2097697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS10910 (K460107A9_20560) - 2086899..2089493 (+) 2595 WP_268698020.1 YfhO family protein -
  ACGHT2_RS10925 - 2090050..2090193 (+) 144 WP_160312943.1 hypothetical protein -
  ACGHT2_RS10935 (K460107A9_20570) rlmH 2090742..2091221 (-) 480 WP_003067023.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACGHT2_RS10940 (K460107A9_20580) htrA 2091432..2092697 (+) 1266 WP_058692592.1 S1C family serine protease Regulator
  ACGHT2_RS10945 (K460107A9_20590) spo0J 2092757..2093533 (+) 777 WP_058692593.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 43798.70 Da        Isoelectric Point: 4.1803

>NTDB_id=109640 ACGHT2_RS10940 WP_058692592.1 2091432..2092697(+) (htrA) [Streptococcus pasteurianus strain k46-0107-A9]
MKKIKLPKLPKLPKFNYKNWLKPLGVILVGFIAGIAGTILVLNMAGISITNVSGSSTKTTTSSVSYSNSNDTTKAVEKVQ
DAVVSVINYKSDSSSSASDLYNQMFGNDSDSSSNSSSTDDLTVYSEGSGVIYKKDGDSAYVVTNNHVIDGAEQIEIMLAN
GTKVVGELVGADTYSDIAVVKISSDNVSTVAEFADSDKLTVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTMTNDDGE
TISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVSIINQLEENGQVIRPALGIS
MINLSDLSTNAIAQLNIPTSVTSGVVVAAVQSGMPAEGNLEQYDVITAIDDKEVTATSDLQSILYTHSVGDSVKVTFYRG
TDKKTATIELTKTTQDLSSSN

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=109640 ACGHT2_RS10940 WP_058692592.1 2091432..2092697(+) (htrA) [Streptococcus pasteurianus strain k46-0107-A9]
GTGAAAAAAATAAAATTACCAAAATTACCCAAGTTACCAAAATTTAATTACAAAAATTGGTTAAAACCATTGGGTGTCAT
TTTAGTCGGCTTTATAGCTGGTATCGCAGGTACAATACTCGTCCTAAACATGGCAGGTATTTCAATCACTAACGTCAGTG
GTTCAAGTACAAAAACAACAACAAGTAGCGTAAGCTATTCTAACTCTAACGATACAACAAAAGCTGTGGAAAAAGTTCAA
GACGCGGTTGTATCTGTTATTAACTACAAATCAGACTCGTCATCTTCTGCAAGTGACCTCTACAATCAAATGTTTGGCAA
TGACTCAGACAGTAGTAGCAATTCAAGCTCTACAGATGATTTGACTGTTTACAGTGAGGGGTCTGGGGTTATTTACAAAA
AAGATGGTGATTCTGCCTATGTCGTCACTAACAATCACGTTATTGATGGTGCCGAACAAATTGAAATTATGCTTGCTAAT
GGAACAAAAGTTGTTGGTGAGCTAGTCGGAGCAGATACTTATTCAGATATTGCTGTTGTTAAAATTTCTTCTGACAATGT
ATCTACAGTTGCTGAATTTGCCGATTCTGATAAATTGACTGTCGGTGAAACTGCTATCGCTATTGGTAGCCCACTTGGTA
CTGAATATGCTAACTCTGTAACACAAGGTATTGTCTCAAGTCTTAGCCGTACAGTAACCATGACAAATGATGATGGTGAA
ACTATCTCAACAAATGCTATCCAAACAGATGCAGCAATTAACCCAGGTAACTCTGGTGGTGCTTTAATTAACATTGAAGG
ACAAGTTATCGGTATCAATTCAAGTAAGATTTCATCTACATCAAGTTCTGGTGAATCTGTCGAAGGTATGGGATTTGCCA
TTCCATCTAACGATGTTGTATCCATTATTAACCAATTGGAAGAAAATGGGCAAGTTATCCGCCCAGCACTTGGTATTTCA
ATGATAAACTTGAGCGACCTTTCAACTAATGCAATTGCTCAACTTAACATTCCAACAAGTGTAACAAGTGGTGTCGTTGT
TGCTGCTGTTCAATCTGGTATGCCTGCTGAAGGTAATCTCGAACAGTACGATGTCATCACAGCTATTGACGACAAAGAAG
TAACAGCTACTTCAGATCTTCAAAGTATTCTTTATACTCATTCTGTTGGTGACTCTGTCAAAGTAACCTTCTACCGTGGA
ACTGATAAGAAAACAGCTACAATTGAATTAACTAAGACAACGCAAGATTTATCTTCCTCAAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.691

96.2

0.622

  htrA Streptococcus gordonii str. Challis substr. CH1

59.559

96.912

0.577

  htrA Streptococcus pneumoniae D39

57.421

97.625

0.561

  htrA Streptococcus pneumoniae TIGR4

57.421

97.625

0.561

  htrA Streptococcus mitis NCTC 12261

57.421

97.625

0.561

  htrA Streptococcus pneumoniae R6

57.421

97.625

0.561

  htrA Streptococcus pneumoniae Rx1

57.421

97.625

0.561


Multiple sequence alignment