Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACGHT2_RS10945 Genome accession   NZ_AP031455
Coordinates   2092757..2093533 (+) Length   258 a.a.
NCBI ID   WP_058692593.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2087757..2098533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS10925 - 2090050..2090193 (+) 144 WP_160312943.1 hypothetical protein -
  ACGHT2_RS10935 (K460107A9_20570) rlmH 2090742..2091221 (-) 480 WP_003067023.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACGHT2_RS10940 (K460107A9_20580) htrA 2091432..2092697 (+) 1266 WP_058692592.1 S1C family serine protease Regulator
  ACGHT2_RS10945 (K460107A9_20590) spo0J 2092757..2093533 (+) 777 WP_058692593.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29617.29 Da        Isoelectric Point: 9.8756

>NTDB_id=109641 ACGHT2_RS10945 WP_058692593.1 2092757..2093533(+) (spo0J) [Streptococcus pasteurianus strain k46-0107-A9]
MPETLTLIKIENISPNPYQPRLEFKQEELEELARSIKANGLIQPIIVRESTVFGYELIAGERRLRASKIAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPRSLSDAVEKGDLSQG
HARVLLTLKNAGEQEKWYQKILTEDLSVRKLERLLKPAKQKKNRSKKKDIFIRNQEEELTKQLGLPVKITISKTGTKGDV
SLYFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=109641 ACGHT2_RS10945 WP_058692593.1 2092757..2093533(+) (spo0J) [Streptococcus pasteurianus strain k46-0107-A9]
ATGCCTGAAACACTCACATTAATCAAAATTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
AGAGCTGGAAGAATTAGCACGTTCTATTAAAGCTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCTGGTGAAAGACGTCTAAGAGCCTCAAAAATAGCAGGTTTAACCGAAATTCCTGCCATCATAAAA
AATATCTCCAATCAGGAGAGCATGCAGCTGGCTATCGTCGAAAATCTGCAACGTTCTGATTTAAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAACTTCTGGAAAAAAATCAAATGACTCATGAAGAATTAGCACAGTTTATGGGAAAATCTCGCCCTT
ACATTACCAATTGCCTCAGATTACTTAATCTTCCTAGAAGTCTCTCTGATGCCGTTGAAAAAGGTGACCTGTCTCAAGGG
CACGCGCGTGTCCTTTTAACCCTTAAAAACGCGGGAGAACAAGAAAAGTGGTATCAAAAAATTCTAACAGAAGACCTTAG
TGTTAGAAAACTTGAACGTTTACTAAAACCTGCTAAACAGAAAAAAAATCGTTCTAAAAAGAAAGATATTTTTATTAGAA
ATCAAGAAGAAGAATTGACTAAACAGTTAGGACTTCCTGTTAAAATTACTATCTCTAAAACCGGCACAAAAGGAGATGTG
AGTTTATATTTTCAGTCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(150-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.311

99.612

0.601

Multiple sequence alignment