Detailed information NTG1093922

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACMG4M_RS00465
• Genome accession: NZ_CP179931
• Coordinates: 84353..85474 (+)
• Length: 373 a.a.
• NCBI ID: WP_035249738.1
• Uniprot ID: -
• Organism: Alcanivorax sp. IL3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 79353..90474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMG4M_RS00445 (ACMG4M_00445)	-	80755..81303 (-)	549	WP_272962778.1	YggT family protein	-
ACMG4M_RS00450 (ACMG4M_00450)	proC	81600..82409 (-)	810	WP_414430502.1	pyrroline-5-carboxylate reductase	-
ACMG4M_RS00455 (ACMG4M_00455)	-	82483..83166 (-)	684	WP_414430503.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACMG4M_RS00460 (ACMG4M_00460)	pilT	83303..84337 (+)	1035	WP_272962781.1	type IV pilus twitching motility protein PilT	Machinery gene
ACMG4M_RS00465 (ACMG4M_00465)	pilU	84353..85474 (+)	1122	WP_035249738.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACMG4M_RS00470 (ACMG4M_00470)	-	85595..86020 (+)	426	WP_035249736.1	TM2 domain-containing protein	-
ACMG4M_RS00475 (ACMG4M_00475)	-	86176..86385 (-)	210	WP_035249734.1	SlyX family protein	-
ACMG4M_RS00480 (ACMG4M_00480)	-	86733..87284 (+)	552	WP_035249732.1	TMEM165/GDT1 family protein	-
ACMG4M_RS00485 (ACMG4M_00485)	-	87379..87933 (+)	555	WP_414430504.1	YaeQ family protein	-
ACMG4M_RS00490 (ACMG4M_00490)	-	88003..88923 (+)	921	WP_414430505.1	glutathione S-transferase family protein	-
ACMG4M_RS00495 (ACMG4M_00495)	arsH	89070..89780 (-)	711	WP_035249726.1	arsenical resistance protein ArsH	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41453.87 Da
• Isoelectric Point: 6.7783

>NTDB_id=1093922 ACMG4M_RS00465 WP_035249738.1 84353..85474(+) (pilU) [Alcanivorax sp. IL3]
MEFEELLKLMVQKGGSDLFITAGVPPSMKVNGKILPVTKSALTPDMTRDIVFGVMTEQQRKEFVAHHECNFAISARGIGR
FRVSAFYQRNLVAMVLRRIETKIPNVDDLRLPPVIKELAMTKRGLVIFVGATGTGKSTSLASMIGYRNKNSKGHIITIED
PIEFIHQHQGCIVTQREVGIDTESFDVALKNTLRQAPDVILIGEIRTPETMDKAIAFAETGHLCLATLHANNANQALDRI
IHFFPADRHGQLWMDLSLNLKGVVAQQLIPTPDGKGRRAAIEVLLGTPLVQDHIRKGEVHMLKQLMSKSREQGMQTFDQA
LYDLYSVGEITYEDAMLHADSPNDLRLMIKLGNETDSSSLDIATRGLSIEDTE

Nucleotide

• Length: 1122 bp

>NTDB_id=1093922 ACMG4M_RS00465 WP_035249738.1 84353..85474(+) (pilU) [Alcanivorax sp. IL3]
ATGGAATTCGAAGAGCTCCTCAAACTGATGGTACAGAAAGGCGGCTCCGACCTGTTCATTACTGCCGGTGTGCCGCCCAG
CATGAAGGTGAACGGCAAGATCCTGCCTGTGACCAAGAGCGCGCTGACCCCGGACATGACCCGGGACATCGTGTTCGGCG
TAATGACCGAACAGCAGCGCAAGGAATTCGTGGCACACCACGAGTGCAACTTCGCCATCTCCGCCCGGGGCATCGGCCGG
TTCCGGGTATCCGCTTTCTACCAGCGCAACCTGGTGGCCATGGTGCTGCGTCGTATCGAAACCAAGATCCCCAATGTGGA
CGACCTGCGTCTGCCGCCAGTGATCAAGGAACTGGCCATGACCAAGCGCGGCCTGGTGATCTTCGTGGGCGCCACCGGTA
CCGGTAAATCCACCTCGCTGGCCTCCATGATCGGCTATCGCAACAAGAACTCGAAGGGCCACATCATCACCATTGAGGAC
CCCATCGAATTCATCCATCAGCATCAGGGTTGTATCGTTACCCAGCGTGAAGTGGGCATTGATACCGAGTCCTTTGATGT
AGCGCTGAAGAACACCCTGCGTCAAGCGCCGGACGTGATCCTGATCGGCGAGATCCGTACCCCGGAAACCATGGACAAGG
CCATTGCCTTCGCCGAAACCGGTCACCTCTGCCTGGCTACCCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGGATC
ATCCATTTCTTTCCGGCGGACCGCCACGGCCAGCTGTGGATGGACCTGTCCCTGAACCTGAAGGGCGTCGTCGCCCAGCA
GCTGATCCCCACCCCGGACGGCAAGGGCCGCCGCGCCGCCATCGAGGTACTGCTGGGCACGCCGCTGGTTCAGGACCACA
TCCGCAAGGGCGAAGTGCACATGCTCAAGCAGCTGATGAGCAAGTCCCGGGAACAGGGCATGCAGACTTTCGACCAGGCC
CTCTACGACCTCTACTCCGTTGGTGAAATCACCTACGAAGACGCCATGCTGCACGCGGACTCACCCAATGACCTGCGTCT
GATGATCAAGCTGGGTAACGAGACTGATTCCTCCAGCCTGGACATCGCCACGCGGGGATTGAGTATCGAGGACACTGAGT
AA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (114-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	79.73	99.196	0.791
pilU	Acinetobacter baylyi ADP1	67.787	95.71	0.649
pilU	Vibrio cholerae strain A1552	55.525	97.051	0.539
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.739	92.493	0.386
pilT	Legionella pneumophila strain Lp02	41.493	89.812	0.373
pilT	Legionella pneumophila strain ERS1305867	41.493	89.812	0.373