Detailed information NTG1089220

Bioinformatically predicted

Overview

• Name: htrA
• Type: Regulator
• Locus tag: ACLJJ6_RS10300
• Genome accession: NZ_CP178375
• Coordinates: 2156903..2158153 (+)
• Length: 416 a.a.
• NCBI ID: WP_412989349.1
• Uniprot ID: -
• Organism: Pediococcus siamensis strain LMG 24279
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2151903..2163153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLJJ6_RS10285 (ACLJJ6_10285)	-	2153524..2154849 (+)	1326	WP_412989346.1	YycH family regulatory protein	-
ACLJJ6_RS10290 (ACLJJ6_10290)	-	2154864..2155946 (+)	1083	WP_412989347.1	two-component system regulatory protein YycI	-
ACLJJ6_RS10295 (ACLJJ6_10295)	-	2155989..2156792 (+)	804	WP_412989348.1	MBL fold metallo-hydrolase	-
ACLJJ6_RS10300 (ACLJJ6_10300)	htrA	2156903..2158153 (+)	1251	WP_412989349.1	S1C family serine protease	Regulator
ACLJJ6_RS10305 (ACLJJ6_10305)	rlmH	2158973..2159452 (+)	480	WP_412989350.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	-
ACLJJ6_RS10310 (ACLJJ6_10310)	-	2159733..2159910 (+)	178	Protein_1984	helix-turn-helix transcriptional regulator	-
ACLJJ6_RS10315 (ACLJJ6_10315)	-	2160589..2162229 (-)	1641	WP_412989351.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 416 a.a.
• Molecular weight: 43024.54 Da
• Isoelectric Point: 10.1758

>NTDB_id=1089220 ACLJJ6_RS10300 WP_412989349.1 2156903..2158153(+) (htrA) [Pediococcus siamensis strain LMG 24279]
MFKNKGLWTVFLTALVAGLISGGIAFGTANYISNRQSESSTAVPSGSNSSGSTKVSNVKVNVSNQSEKAYSSIKNAVVTV
INLKKESSNSSNSLYGSIFGESSSSSSSNSNKLETYAEGSGVIYKKSGNAAYVVTNNHVISGSNAVEIIMSNGKKVSAKV
VGKDSVTDLAVLKINSSVVTTVASFGDSNNIKVGETALAIGSPLGSDYATSLTQGIISAKKRTVSTTNEAGQETGEATVI
QTDAAINSGNSGGPLINLAGQVIGINSMKLSSSSSGTSVEGMGFAIPSNEVVTIINQLISKGKIVRPALGASLIDLTDIV
ASQQKSVLKLPSKVTEGAVIYKTYAGSPARKAGLKQYDVITKLDGTKITSVATLRDKLYKLKVGDKVSIGWYHNGSYKTA
TIHLTETTSTLNSQAK

Nucleotide

• Length: 1251 bp

>NTDB_id=1089220 ACLJJ6_RS10300 WP_412989349.1 2156903..2158153(+) (htrA) [Pediococcus siamensis strain LMG 24279]
ATGTTTAAAAACAAGGGATTATGGACAGTATTTCTTACAGCACTTGTTGCTGGTTTAATCAGTGGGGGAATTGCCTTTGG
AACAGCTAATTACATTAGTAATCGGCAGTCAGAATCCTCAACTGCAGTACCAAGTGGTTCCAACAGTTCAGGTTCAACGA
AGGTCAGCAACGTGAAGGTTAATGTCAGCAATCAATCTGAAAAAGCCTACAGCAGCATTAAAAATGCGGTTGTGACGGTC
ATTAACCTGAAGAAAGAAAGCTCAAATTCAAGTAACAGCTTATATGGTTCAATCTTCGGTGAGTCTTCCTCAAGTTCCAG
TTCAAATTCTAATAAGCTAGAAACATACGCGGAAGGTTCTGGTGTGATCTACAAAAAGAGTGGCAATGCAGCTTACGTTG
TTACCAATAATCACGTTATTTCTGGTTCTAATGCCGTTGAAATTATCATGAGCAATGGTAAAAAGGTTTCTGCTAAAGTT
GTTGGTAAAGATTCAGTTACCGATTTAGCCGTTTTGAAAATTAATTCTTCAGTGGTCACCACAGTTGCAAGTTTTGGAGA
TTCCAACAATATTAAGGTTGGCGAAACAGCACTGGCAATTGGGTCACCGTTAGGTTCAGATTACGCAACGTCACTGACAC
AAGGGATTATTTCTGCTAAGAAGCGGACAGTTTCAACGACAAATGAAGCTGGTCAGGAAACGGGTGAAGCAACAGTTATC
CAGACAGATGCAGCGATTAACTCGGGGAACTCTGGTGGTCCATTGATTAACTTAGCTGGGCAGGTTATTGGGATTAATTC
CATGAAGCTTTCGAGCAGCTCTTCCGGGACTAGTGTTGAAGGAATGGGCTTCGCAATTCCTTCTAATGAAGTGGTCACGA
TCATTAACCAGTTGATTTCAAAAGGTAAAATTGTTCGTCCAGCATTAGGTGCATCTTTGATTGATTTGACTGATATTGTT
GCTAGTCAACAAAAATCAGTGCTAAAGCTACCTTCAAAGGTAACGGAAGGCGCAGTTATTTACAAGACATATGCCGGCTC
TCCTGCACGTAAAGCGGGCTTGAAGCAGTATGATGTTATTACCAAACTTGATGGGACTAAGATTACAAGTGTCGCAACCT
TACGTGATAAGCTGTACAAGCTTAAAGTGGGCGACAAGGTCTCAATTGGCTGGTATCACAATGGCTCCTACAAGACAGCG
ACAATCCATCTGACAGAAACAACCAGCACACTAAATTCACAAGCGAAATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (307-404)

• Trypsin-like peptidase domain (Trypsin_2) (119-265)

• Peptidase family M50 (Peptidase_M50) (251-407)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
htrA	Streptococcus mutans UA159	49.02	98.077	0.481
htrA	Streptococcus gordonii str. Challis substr. CH1	43.062	100	0.433
htrA	Streptococcus mitis NCTC 12261	42.718	99.038	0.423
htrA	Streptococcus pneumoniae TIGR4	46.857	84.135	0.394
htrA	Streptococcus pneumoniae Rx1	46.857	84.135	0.394
htrA	Streptococcus pneumoniae D39	46.857	84.135	0.394
htrA	Streptococcus pneumoniae R6	46.857	84.135	0.394