Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACKKE8_RS31525 | Genome accession | NZ_CP176370 |
| Coordinates | 6534421..6534900 (-) | Length | 159 a.a. |
| NCBI ID | WP_016739386.1 | Uniprot ID | A0A2Z4MR90 |
| Organism | Brevibacillus fortis strain LJQJ21 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 6529421..6539900
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKKE8_RS31505 (ACKKE8_31505) | rplI | 6530728..6531171 (-) | 444 | WP_409179235.1 | 50S ribosomal protein L9 | - |
| ACKKE8_RS31510 (ACKKE8_31510) | - | 6531198..6533135 (-) | 1938 | WP_007720189.1 | DHH family phosphoesterase | - |
| ACKKE8_RS31515 (ACKKE8_31515) | - | 6533140..6534048 (-) | 909 | WP_409176460.1 | DUF2232 domain-containing protein | - |
| ACKKE8_RS31520 (ACKKE8_31520) | rpsR | 6534150..6534380 (-) | 231 | WP_016739387.1 | 30S ribosomal protein S18 | - |
| ACKKE8_RS31525 (ACKKE8_31525) | ssbA | 6534421..6534900 (-) | 480 | WP_016739386.1 | single-stranded DNA-binding protein | Machinery gene |
| ACKKE8_RS31530 (ACKKE8_31530) | rpsF | 6534930..6535217 (-) | 288 | WP_007720183.1 | 30S ribosomal protein S6 | - |
| ACKKE8_RS31535 (ACKKE8_31535) | ychF | 6535361..6536461 (-) | 1101 | WP_376895160.1 | redox-regulated ATPase YchF | - |
| ACKKE8_RS31540 (ACKKE8_31540) | - | 6536676..6537299 (+) | 624 | WP_409176461.1 | NAD(P)-dependent oxidoreductase | - |
| ACKKE8_RS31545 (ACKKE8_31545) | pepF | 6537365..6539275 (-) | 1911 | WP_409176462.1 | oligoendopeptidase F | - |
| ACKKE8_RS31550 (ACKKE8_31550) | - | 6539633..6539719 (+) | 87 | WP_017246824.1 | YjcZ family sporulation protein | - |
Sequence
Protein
Download Length: 159 a.a. Molecular weight: 17230.12 Da Isoelectric Point: 5.2753
>NTDB_id=1079821 ACKKE8_RS31525 WP_016739386.1 6534421..6534900(-) (ssbA) [Brevibacillus fortis strain LJQJ21]
MNKVILIGNLTKDPELRYTPNGVAVATFTVAVNRPRTNQAGERETDFINIVAWQKLADLCASYLRKGRQAAIEGRMQTRS
YDNKEGKKVYVTEVVAENVQFLGGRGNESGGDNSGYDPGPGMGGGNKPSGQRNNDYDPFGDPFASAGKPINISDDDLPF
MNKVILIGNLTKDPELRYTPNGVAVATFTVAVNRPRTNQAGERETDFINIVAWQKLADLCASYLRKGRQAAIEGRMQTRS
YDNKEGKKVYVTEVVAENVQFLGGRGNESGGDNSGYDPGPGMGGGNKPSGQRNNDYDPFGDPFASAGKPINISDDDLPF
Nucleotide
Download Length: 480 bp
>NTDB_id=1079821 ACKKE8_RS31525 WP_016739386.1 6534421..6534900(-) (ssbA) [Brevibacillus fortis strain LJQJ21]
ATGAATAAAGTCATTCTCATCGGCAACCTGACGAAAGATCCTGAACTTCGCTACACGCCAAATGGCGTTGCCGTTGCTAC
TTTTACTGTGGCCGTCAATCGTCCCCGCACCAATCAAGCGGGAGAGAGAGAAACGGACTTCATTAACATTGTCGCTTGGC
AAAAACTTGCCGACCTGTGCGCAAGCTATTTGCGTAAAGGTAGACAAGCAGCCATCGAAGGACGTATGCAAACACGTTCC
TATGATAATAAAGAAGGTAAAAAGGTATACGTGACGGAAGTCGTTGCGGAGAACGTTCAATTTTTGGGCGGTCGAGGCAA
TGAATCCGGCGGAGACAATTCAGGATACGATCCAGGACCGGGCATGGGTGGCGGTAACAAACCATCCGGTCAACGAAATA
ATGACTATGATCCGTTTGGTGATCCTTTCGCGAGTGCAGGCAAGCCGATCAACATTTCAGATGATGACTTGCCGTTCTAA
ATGAATAAAGTCATTCTCATCGGCAACCTGACGAAAGATCCTGAACTTCGCTACACGCCAAATGGCGTTGCCGTTGCTAC
TTTTACTGTGGCCGTCAATCGTCCCCGCACCAATCAAGCGGGAGAGAGAGAAACGGACTTCATTAACATTGTCGCTTGGC
AAAAACTTGCCGACCTGTGCGCAAGCTATTTGCGTAAAGGTAGACAAGCAGCCATCGAAGGACGTATGCAAACACGTTCC
TATGATAATAAAGAAGGTAAAAAGGTATACGTGACGGAAGTCGTTGCGGAGAACGTTCAATTTTTGGGCGGTCGAGGCAA
TGAATCCGGCGGAGACAATTCAGGATACGATCCAGGACCGGGCATGGGTGGCGGTAACAAACCATCCGGTCAACGAAATA
ATGACTATGATCCGTTTGGTGATCCTTTCGCGAGTGCAGGCAAGCCGATCAACATTTCAGATGATGACTTGCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
53.488 |
100 |
0.579 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
43.787 |
100 |
0.465 |
| ssb | Vibrio cholerae strain A1552 |
36.757 |
100 |
0.428 |
| ssb | Neisseria gonorrhoeae MS11 |
37.143 |
100 |
0.409 |
| ssb | Neisseria meningitidis MC58 |
36.571 |
100 |
0.403 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.384 |