Detailed information NTG1071015

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACIO05_RS03585
• Genome accession: NZ_CP173232
• Coordinates: 700927..702027 (+)
• Length: 366 a.a.
• NCBI ID: WP_410679125.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/OH-USA/20230213/S1-3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 695927..707027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIO05_RS03565 (ACIO05_03565)	-	696095..697129 (+)	1035	WP_410679128.1	AI-2E family transporter	-
ACIO05_RS03570 (ACIO05_03570)	-	697159..698730 (+)	1572	WP_410679127.1	tetratricopeptide repeat protein	-
ACIO05_RS03575 (ACIO05_03575)	-	699037..700206 (+)	1170	WP_410679126.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
ACIO05_RS03580 (ACIO05_03580)	pilF/pilF2	700240..700782 (+)	543	WP_110479719.1	type IV pilus biogenesis/stability protein PilW	Machinery gene
ACIO05_RS03585 (ACIO05_03585)	dprA	700927..702027 (+)	1101	WP_410679125.1	DNA-processing protein DprA	Machinery gene
ACIO05_RS03590 (ACIO05_03590)	rsmD	702024..702632 (-)	609	WP_264245187.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACIO05_RS03595 (ACIO05_03595)	ftsY	702788..704281 (+)	1494	WP_410681550.1	signal recognition particle-docking protein FtsY	-
ACIO05_RS03600 (ACIO05_03600)	glpQ	704827..705921 (-)	1095	WP_264256084.1	glycerophosphodiester phosphodiesterase	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 40922.76 Da
• Isoelectric Point: 5.0734

>NTDB_id=1071015 ACIO05_RS03585 WP_410679125.1 700927..702027(+) (dprA) [Avibacterium paragallinarum strain npAP/OH-USA/20230213/S1-3]
MITNEMLLRLLQIPKLGANTIQKILGEISFTQLLDYDEYAFKQIGWSEKQIQRWFYPERKFIDPALQWAESAGNFLLNFT
DEDYPYLLKQIPSAPPILFLQGNLTALSQPQIAIVGSRYCSNYGEYWAKYFASELSLAGFAITSGLALGIDGFCHQAVVD
IQGQTLAVLGSGLDKVYPAKHRRLAEQIIEHNGTLISEFLPAQPPVAENFPRRNRIISGLSLGTLIIEATERSGSLITAR
YALEQNREVFALPGNIQNGFSEGCHKLIKQGATLVESVTDILENIPHYQYVTPNYTEQKSPSSANEQLTSEPPSYPKLYA
QLSHIPISLDELSARLSLPIDVLLTQLLSLELQQLAVCENGLYRRS

Nucleotide

• Length: 1101 bp

>NTDB_id=1071015 ACIO05_RS03585 WP_410679125.1 700927..702027(+) (dprA) [Avibacterium paragallinarum strain npAP/OH-USA/20230213/S1-3]
ATGATAACCAATGAGATGTTACTCCGTTTGCTCCAAATTCCTAAACTTGGAGCAAATACTATTCAAAAAATACTGGGTGA
AATTAGTTTTACACAGCTTTTAGATTATGATGAATACGCGTTTAAACAGATTGGTTGGTCAGAAAAGCAAATTCAACGTT
GGTTTTACCCAGAACGAAAATTCATTGATCCTGCGTTACAATGGGCAGAAAGTGCGGGTAATTTTTTGCTTAATTTTACC
GATGAAGATTACCCTTATTTGCTGAAGCAAATTCCCTCCGCTCCGCCGATTTTATTTTTGCAAGGAAATTTGACCGCACT
TTCTCAACCACAAATTGCAATAGTAGGTAGCCGTTATTGCTCGAATTATGGGGAATATTGGGCGAAGTATTTTGCTTCAG
AGTTGAGTCTTGCGGGCTTTGCGATAACCAGTGGGCTAGCTTTAGGGATCGACGGATTTTGTCATCAAGCCGTGGTGGAT
ATTCAAGGGCAAACGCTGGCGGTGCTTGGAAGTGGGTTGGATAAGGTGTATCCTGCAAAACATCGCCGTTTGGCTGAGCA
AATTATTGAGCATAACGGCACATTGATTTCCGAATTTCTCCCCGCGCAACCGCCCGTTGCGGAGAATTTCCCACGCCGAA
ACCGTATTATTAGCGGGCTTTCGCTTGGCACGCTAATTATTGAAGCCACCGAGCGGAGCGGTTCACTCATTACGGCTCGT
TATGCGTTGGAGCAAAACCGTGAGGTCTTTGCCTTGCCGGGCAATATTCAAAATGGCTTTAGTGAGGGCTGTCATAAGCT
CATCAAGCAAGGGGCAACATTAGTGGAGAGCGTGACGGATATTTTAGAAAATATCCCACATTATCAGTATGTTACACCGA
ATTATACCGAACAGAAATCGCCATCGTCGGCGAACGAGCAGCTAACTTCAGAGCCACCAAGTTATCCCAAACTTTACGCT
CAATTAAGCCACATTCCCATTAGCCTTGATGAACTTTCAGCCCGTTTGTCATTGCCGATTGATGTCTTATTAACCCAATT
ATTAAGTTTAGAATTGCAACAATTAGCGGTTTGTGAAAATGGGCTGTATCGGCGAAGTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-276)

• DprA winged helix domain (DprA_WH) (312-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	62.703	100	0.634
dprA	Glaesserella parasuis strain SC1401	56.571	95.628	0.541
dprA	Vibrio cholerae strain A1552	43.443	100	0.434
dprA	Vibrio campbellii strain DS40M4	42.618	98.087	0.418
dprA	Legionella pneumophila strain ERS1305867	39.51	100	0.396
dprA	Acinetobacter baumannii strain A118	39.776	97.541	0.388