Detailed information NTG1070014

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACIHQS_RS14770
• Genome accession: NZ_CP173025
• Coordinates: 3107378..3108436 (-)
• Length: 352 a.a.
• NCBI ID: WP_374973966.1
• Uniprot ID: -
• Organism: Acinetobacter venetianus strain AVYS1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3102378..3113436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIHQS_RS14745 (ACIHQS_14745)	aroK	3102699..3103259 (-)	561	WP_404228909.1	shikimate kinase AroK	-
ACIHQS_RS14750 (ACIHQS_14750)	pilQ	3103279..3105411 (-)	2133	WP_404231745.1	type IV pilus secretin PilQ	Machinery gene
ACIHQS_RS14755 (ACIHQS_14755)	pilP	3105473..3106000 (-)	528	WP_004877829.1	pilus assembly protein PilP	Machinery gene
ACIHQS_RS14760 (ACIHQS_14760)	pilO	3106003..3106737 (-)	735	WP_404228912.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACIHQS_RS14765 (ACIHQS_14765)	pilN	3106734..3107378 (-)	645	WP_374973967.1	PilN domain-containing protein	Machinery gene
ACIHQS_RS14770 (ACIHQS_14770)	comM	3107378..3108436 (-)	1059	WP_374973966.1	pilus assembly protein PilM	Machinery gene
ACIHQS_RS14775 (ACIHQS_14775)	ponA	3108599..3111187 (+)	2589	WP_404228916.1	penicillin-binding protein PBP1a	-
ACIHQS_RS14780 (ACIHQS_14780)	-	3111200..3112018 (-)	819	WP_404228919.1	putative RNA methyltransferase	-
ACIHQS_RS14785 (ACIHQS_14785)	mraY	3112079..3113197 (-)	1119	WP_007480741.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39145.85 Da
• Isoelectric Point: 4.5488

>NTDB_id=1070014 ACIHQS_RS14770 WP_374973966.1 3107378..3108436(-) (comM) [Acinetobacter venetianus strain AVYS1]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYALMPLPENSVVEKSILNPEAVGDALERVVNLANPHTTNVAI
AIPTSMVINKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLPDKLPNPNRVNVLLVATRTENVDTRVEVLEL
ANLTAKIAEVESYAMERAFSVFSDTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQSRYGLSFEE
AGRAKKERSLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1070014 ACIHQS_RS14770 WP_374973966.1 3107378..3108436(-) (comM) [Acinetobacter venetianus strain AVYS1]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTAGGGGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCGTTGATGCCGCTGCCAGAAAACAGTGTCGTCGAAAAAAGCA
TTCTTAATCCTGAAGCAGTTGGTGATGCCCTTGAGCGTGTTGTCAATTTAGCGAACCCTCACACTACCAATGTGGCAATC
GCAATTCCAACATCAATGGTGATTAATAAGATCATTGAGATGGATGCTGATATGTCAGATGAAGAGCGTGAAGTGCAAAT
TCGTATGGATGCTGAACAGTACATTCCGTTTCCATTAGATGAGGTGAGCCTTGATTTTGAGGTTCTGCCTGATAAATTGC
CAAATCCCAATCGCGTTAACGTCCTATTAGTTGCTACCCGAACAGAAAATGTTGACACGCGTGTCGAAGTTCTTGAGCTT
GCGAACTTAACAGCAAAAATTGCTGAAGTTGAAAGTTATGCAATGGAACGAGCTTTTAGTGTGTTTTCTGATACGCTTCC
AATGGGTGCGAATACTGTTGGCATTCTAGATATTGGTCATACCATGACAACTTTATCTGTGATGCAAAAAGGTAAAATCA
TTTATACGCGTGAGCAAGTATTTGGTGGTCGCCAGCTTACTCAGGATGTGCAAAGCCGCTACGGTTTGTCATTTGAAGAA
GCGGGTCGGGCAAAAAAAGAAAGATCGCTCCCAGATGATTATGACACTGAGGTTTTGGAACCTTTCCTTGATGCGGTTGT
GCAGCAAGCTGCACGCTCACTGCAATTTTTCTTCTCATCATCACAATTTAATGAAATTGATCATATTTTATTGGCTGGCG
GTAATGCCAATATTCCTGGCTTAGCGAAGCTATTGCAACAGAAACTAGGTTATCGCGTTACGATTGCTAACCCATTCCTA
CAAATGGGCTTTTCTCCCCAAATTGACATTAAAAAAATAGAAAATGATGCTTCCTCTTTGATGGTGGCATGTGGTCTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.784	100	0.878
pilM	Acinetobacter baumannii D1279779	87.784	100	0.878
comM	Acinetobacter baylyi ADP1	82.102	100	0.821
pilM	Legionella pneumophila strain ERS1305867	40.678	100	0.409