Detailed information
Bioinformatically predicted
Overview
| Name | comR/comR1 | Type | Regulator |
| Locus tag | ACF1RT_RS08375 | Genome accession | NZ_CP172847 |
| Coordinates | 1678085..1678987 (+) | Length | 300 a.a. |
| NCBI ID | WP_226710880.1 | Uniprot ID | - |
| Organism | Streptococcus mutans strain DPC6143 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1673085..1683987
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF1RT_RS08350 (ACF1RT_08350) | rimI | 1673913..1674347 (-) | 435 | WP_019313076.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| ACF1RT_RS08355 (ACF1RT_08355) | tsaB | 1674347..1675033 (-) | 687 | WP_400260313.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| ACF1RT_RS08360 (ACF1RT_08360) | - | 1675044..1675502 (-) | 459 | WP_002262634.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| ACF1RT_RS08365 (ACF1RT_08365) | - | 1675676..1676722 (+) | 1047 | WP_002262467.1 | SDR family oxidoreductase | - |
| ACF1RT_RS08370 (ACF1RT_08370) | - | 1676743..1677711 (+) | 969 | WP_226710974.1 | aldo/keto reductase | - |
| ACF1RT_RS08375 (ACF1RT_08375) | comR/comR1 | 1678085..1678987 (+) | 903 | WP_226710880.1 | XRE family transcriptional regulator | Regulator |
| ACF1RT_RS08380 (ACF1RT_08380) | - | 1679504..1679641 (-) | 138 | WP_002262470.1 | hypothetical protein | - |
| ACF1RT_RS08385 (ACF1RT_08385) | - | 1679619..1679858 (-) | 240 | WP_002262471.1 | hypothetical protein | - |
| ACF1RT_RS08390 (ACF1RT_08390) | - | 1679876..1680010 (-) | 135 | WP_002262472.1 | hypothetical protein | - |
| ACF1RT_RS08395 (ACF1RT_08395) | - | 1680053..1681291 (-) | 1239 | WP_002293363.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| ACF1RT_RS08400 (ACF1RT_08400) | - | 1681307..1682215 (-) | 909 | WP_002262474.1 | hypothetical protein | - |
| ACF1RT_RS08405 (ACF1RT_08405) | - | 1682226..1682936 (-) | 711 | WP_002262475.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ACF1RT_RS08410 (ACF1RT_08410) | - | 1682923..1683666 (-) | 744 | Protein_1622 | methyltransferase domain-containing protein | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 34909.14 Da Isoelectric Point: 4.4778
>NTDB_id=1069109 ACF1RT_RS08375 WP_226710880.1 1678085..1678987(+) (comR/comR1) [Streptococcus mutans strain DPC6143]
MTIKEDLGRRIKAERNRKQLTQSLLCGDETKLTIRQLQRIEGGQSLPTLEKLEFIADRLGTKIADLLEGSDIQLPDDYWE
LKGQIVKFPTYADKVRLQQKQNLIEEIYDKYFDILPEDELLFLDLSENILDSFHEKDIPNIEEIYDDAFEQVLKKETFAF
NDYLYMSYFLQKCGKTADYDQTTFKLLEQKLLKQELTVDELYNIELLIAVMEASGVYALHNDYQNLLPLMKKAQQIIDRA
QLHTYKPALLELEAKYYVKVVKDKGKAKELYQQALVMGEILSDPVIIADVKMEMANDGID
MTIKEDLGRRIKAERNRKQLTQSLLCGDETKLTIRQLQRIEGGQSLPTLEKLEFIADRLGTKIADLLEGSDIQLPDDYWE
LKGQIVKFPTYADKVRLQQKQNLIEEIYDKYFDILPEDELLFLDLSENILDSFHEKDIPNIEEIYDDAFEQVLKKETFAF
NDYLYMSYFLQKCGKTADYDQTTFKLLEQKLLKQELTVDELYNIELLIAVMEASGVYALHNDYQNLLPLMKKAQQIIDRA
QLHTYKPALLELEAKYYVKVVKDKGKAKELYQQALVMGEILSDPVIIADVKMEMANDGID
Nucleotide
Download Length: 903 bp
>NTDB_id=1069109 ACF1RT_RS08375 WP_226710880.1 1678085..1678987(+) (comR/comR1) [Streptococcus mutans strain DPC6143]
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAAAGCCTTTTGTGCGG
AGATGAAACAAAACTGACCATTCGACAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACCCTAGAAAAATTAGAAT
TCATTGCTGATCGCTTAGGAACTAAAATAGCCGACCTGCTGGAAGGCAGCGATATCCAGCTGCCAGATGATTACTGGGAG
CTAAAGGGGCAGATTGTTAAATTTCCCACCTATGCCGATAAGGTAAGGCTCCAGCAAAAGCAGAATCTAATTGAAGAAAT
TTATGACAAGTACTTTGACATCCTGCCTGAGGATGAACTGCTCTTTTTAGATCTATCAGAAAATATCCTAGACAGTTTTC
ATGAAAAAGATATTCCTAATATTGAGGAGATTTACGACGATGCCTTTGAACAAGTCCTCAAAAAGGAGACCTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAAAAGTGCGGAAAAACAGCGGACTATGATCAGACAACTTTCAAGTTGCT
TGAGCAAAAATTGCTCAAGCAAGAGCTAACAGTAGACGAACTTTATAATATTGAACTTTTGATTGCTGTTATGGAGGCAT
CAGGTGTTTATGCCCTTCATAATGATTACCAGAATCTTCTTCCTTTAATGAAGAAGGCTCAGCAGATTATCGATAGGGCT
CAGCTTCACACCTATAAACCAGCACTTTTAGAGCTTGAAGCCAAGTACTATGTCAAGGTCGTCAAGGATAAGGGAAAAGC
TAAGGAACTCTATCAGCAAGCCTTGGTGATGGGCGAAATTCTAAGTGATCCTGTTATAATTGCAGATGTTAAAATGGAGA
TGGCAAATGATGGAATAGACTAG
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAAAGCCTTTTGTGCGG
AGATGAAACAAAACTGACCATTCGACAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACCCTAGAAAAATTAGAAT
TCATTGCTGATCGCTTAGGAACTAAAATAGCCGACCTGCTGGAAGGCAGCGATATCCAGCTGCCAGATGATTACTGGGAG
CTAAAGGGGCAGATTGTTAAATTTCCCACCTATGCCGATAAGGTAAGGCTCCAGCAAAAGCAGAATCTAATTGAAGAAAT
TTATGACAAGTACTTTGACATCCTGCCTGAGGATGAACTGCTCTTTTTAGATCTATCAGAAAATATCCTAGACAGTTTTC
ATGAAAAAGATATTCCTAATATTGAGGAGATTTACGACGATGCCTTTGAACAAGTCCTCAAAAAGGAGACCTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAAAAGTGCGGAAAAACAGCGGACTATGATCAGACAACTTTCAAGTTGCT
TGAGCAAAAATTGCTCAAGCAAGAGCTAACAGTAGACGAACTTTATAATATTGAACTTTTGATTGCTGTTATGGAGGCAT
CAGGTGTTTATGCCCTTCATAATGATTACCAGAATCTTCTTCCTTTAATGAAGAAGGCTCAGCAGATTATCGATAGGGCT
CAGCTTCACACCTATAAACCAGCACTTTTAGAGCTTGAAGCCAAGTACTATGTCAAGGTCGTCAAGGATAAGGGAAAAGC
TAAGGAACTCTATCAGCAAGCCTTGGTGATGGGCGAAATTCTAAGTGATCCTGTTATAATTGCAGATGTTAAAATGGAGA
TGGCAAATGATGGAATAGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
75.333 |
100 |
0.753 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
69.333 |
100 |
0.693 |
| comR | Streptococcus thermophilus LMD-9 |
41.137 |
99.667 |
0.41 |
| comR | Streptococcus thermophilus LMG 18311 |
41.137 |
99.667 |
0.41 |
| comR | Streptococcus salivarius strain HSISS4 |
41.137 |
99.667 |
0.41 |
| comR | Streptococcus salivarius SK126 |
40.134 |
99.667 |
0.4 |