Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACF1RT_RS01150 | Genome accession | NZ_CP172847 |
| Coordinates | 232795..233748 (+) | Length | 317 a.a. |
| NCBI ID | WP_002269808.1 | Uniprot ID | - |
| Organism | Streptococcus mutans strain DPC6143 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 227795..238748
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF1RT_RS01110 (ACF1RT_01110) | - | 228561..228944 (+) | 384 | WP_002264248.1 | DUF1033 family protein | - |
| ACF1RT_RS01115 (ACF1RT_01115) | comYA | 229074..230015 (+) | 942 | WP_002263435.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACF1RT_RS01120 (ACF1RT_01120) | comYB | 229951..230982 (+) | 1032 | WP_255262788.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACF1RT_RS01125 (ACF1RT_01125) | comYC | 230982..231296 (+) | 315 | WP_002263437.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACF1RT_RS01130 (ACF1RT_01130) | comYD | 231283..231687 (+) | 405 | WP_002263438.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACF1RT_RS01135 (ACF1RT_01135) | comYE | 231659..231952 (+) | 294 | WP_002263439.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACF1RT_RS01140 (ACF1RT_01140) | comYF | 231939..232373 (+) | 435 | WP_002263440.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACF1RT_RS01145 (ACF1RT_01145) | comYG | 232351..232740 (+) | 390 | WP_226711279.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACF1RT_RS01150 (ACF1RT_01150) | comYH | 232795..233748 (+) | 954 | WP_002269808.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACF1RT_RS01155 (ACF1RT_01155) | - | 233807..235006 (+) | 1200 | WP_002263443.1 | acetate kinase | - |
| ACF1RT_RS01160 (ACF1RT_01160) | tnpA | 235219..235682 (+) | 464 | Protein_203 | IS200/IS605 family transposase | - |
| ACF1RT_RS01165 (ACF1RT_01165) | - | 236310..236555 (+) | 246 | WP_002263444.1 | helix-turn-helix transcriptional regulator | - |
| ACF1RT_RS01170 (ACF1RT_01170) | - | 236524..236964 (+) | 441 | WP_002264006.1 | hypothetical protein | - |
| ACF1RT_RS01175 (ACF1RT_01175) | - | 237017..237679 (+) | 663 | WP_002263446.1 | type II CAAX endopeptidase family protein | - |
| ACF1RT_RS01180 (ACF1RT_01180) | proC | 237764..238534 (-) | 771 | WP_002263447.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36286.59 Da Isoelectric Point: 5.2379
>NTDB_id=1069063 ACF1RT_RS01150 WP_002269808.1 232795..233748(+) (comYH) [Streptococcus mutans strain DPC6143]
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNVCYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNVCYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
Nucleotide
Download Length: 954 bp
>NTDB_id=1069063 ACF1RT_RS01150 WP_002269808.1 232795..233748(+) (comYH) [Streptococcus mutans strain DPC6143]
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGTTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGTTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
99.369 |
100 |
0.994 |
| comYH | Streptococcus mutans UA140 |
99.369 |
100 |
0.994 |