Detailed information NTG0106621

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AABJ45_RS10450
• Genome accession: NZ_AP028611
• Coordinates: 2033282..2033686 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588028.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep6
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2028282..2038686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ45_RS10410 (TKY121527_20420)	rnpA	2028696..2029067 (-)	372	WP_000739253.1	ribonuclease P protein component	-
AABJ45_RS10415	-	2029084..2029215 (-)	132	WP_000768904.1	hypothetical protein	-
AABJ45_RS10420 (TKY121527_20430)	-	2029216..2030406 (-)	1191	WP_000167757.1	acetate kinase	-
AABJ45_RS10425 (TKY121527_20440)	comYH	2030457..2031410 (-)	954	WP_000345135.1	class I SAM-dependent methyltransferase	Machinery gene
AABJ45_RS10430	-	2031471..2032065 (-)	595	Protein_2031	methyltransferase domain-containing protein	-
AABJ45_RS10435 (TKY121527_20470)	comGG/cglG	2032202..2032615 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
AABJ45_RS10440 (TKY121527_20480)	comGF/cglF	2032593..2033054 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
AABJ45_RS10445 (TKY121527_20490)	comGE/cglE	2033017..2033319 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AABJ45_RS10450 (TKY121527_20500)	comGD/cglD	2033282..2033686 (-)	405	WP_000588028.1	competence type IV pilus minor pilin ComGD	Machinery gene
AABJ45_RS10455 (TKY121527_20510)	comGC/cglC	2033679..2034005 (-)	327	WP_000738627.1	comG operon protein ComGC	Machinery gene
AABJ45_RS10460 (TKY121527_20520)	comGB/cglB	2034007..2035023 (-)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
AABJ45_RS10465 (TKY121527_20530)	comGA/cglA/cilD	2034971..2035912 (-)	942	WP_000249564.1	competence type IV pilus ATPase ComGA	Machinery gene
AABJ45_RS10470 (TKY121527_20540)	-	2035988..2036353 (-)	366	WP_000286415.1	DUF1033 family protein	-
AABJ45_RS10475 (TKY121527_20550)	-	2036504..2037562 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14650.83 Da
• Isoelectric Point: 10.2164

>NTDB_id=106621 AABJ45_RS10450 WP_000588028.1 2033282..2033686(-) (comGD/cglD) [Streptococcus pneumoniae strain Sep6]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=106621 AABJ45_RS10450 WP_000588028.1 2033282..2033686(-) (comGD/cglD) [Streptococcus pneumoniae strain Sep6]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	100	100	1
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463