Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   ACFKHJ_RS10690 Genome accession   NZ_CP170759
Coordinates   2052626..2053807 (+) Length   393 a.a.
NCBI ID   WP_392452687.1    Uniprot ID   -
Organism   Streptococcus parasuis strain FZ1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2047626..2058807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFKHJ_RS10660 - 2048256..2050835 (+) 2580 WP_392452685.1 YfhO family protein -
  ACFKHJ_RS10680 - 2051264..2051947 (-) 684 WP_171989295.1 YoaK family protein -
  ACFKHJ_RS10685 rlmH 2051954..2052433 (-) 480 WP_239604380.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACFKHJ_RS10690 htrA 2052626..2053807 (+) 1182 WP_392452687.1 S1C family serine protease Regulator
  ACFKHJ_RS10695 spo0J 2053870..2054628 (+) 759 WP_171989297.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 393 a.a.        Molecular weight: 41168.82 Da        Isoelectric Point: 4.2375

>NTDB_id=1059239 ACFKHJ_RS10690 WP_392452687.1 2052626..2053807(+) (htrA) [Streptococcus parasuis strain FZ1]
MKKLLKFVILFVVGFLGGIGGYYFASSTLTQGNSTSNQANTTSVSNVQYTNDTSTTQAVEKVQDAVVSVINYQTQSSNSL
SSIFGNIESSDELAVAGEGSGVIYKKDGDTAYIVTNNHVISGAEKIDILLASGEKLSGELVGADTYSDIAVIKIAADKVT
TIAEFANSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQTEDGQTISTNAIQTDTAINPGNSGGPLINIQGQ
VIGINSSKITSSSISSSGVAVEGMGFAIPSNDTVQIINQLETNGKVTRPALGVQMVNLTDLSTSQLEKAGLANTDLTSGV
LIVSTQSGLPADGKFEPYDVIIEIDGETIENKSDLQSELYKHQIGDTITVTYYRNNKKMTVDIKLTHSTDDLS

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=1059239 ACFKHJ_RS10690 WP_392452687.1 2052626..2053807(+) (htrA) [Streptococcus parasuis strain FZ1]
ATGAAAAAATTATTGAAATTTGTTATTTTGTTTGTTGTTGGATTTTTAGGAGGAATTGGTGGGTATTACTTTGCTTCATC
AACTCTGACTCAAGGAAATTCTACTTCAAATCAAGCAAATACAACCAGTGTGAGCAATGTTCAATATACCAACGATACTT
CCACCACTCAAGCTGTGGAAAAAGTTCAAGATGCTGTTGTCTCCGTTATCAATTATCAAACTCAATCATCGAATAGCCTC
AGTTCTATTTTTGGCAACATTGAAAGTTCAGATGAGCTAGCTGTTGCTGGAGAAGGTTCAGGTGTTATTTATAAAAAAGA
TGGTGATACAGCATATATTGTTACAAACAACCACGTAATTTCAGGTGCTGAAAAAATCGATATACTTTTGGCTTCTGGAG
AAAAGCTTAGCGGAGAACTCGTAGGTGCAGATACTTATTCAGACATTGCTGTTATCAAAATTGCTGCAGATAAAGTGACC
ACTATTGCTGAATTTGCTAATTCAGACACAATTAAAGTTGGAGAAACTGCGATTGCAATTGGTAGCCCATTAGGAAGTGT
CTATGCAAATACAGTAACTCAGGGGATTATTTCTAGTCTCAGTCGTACAGTAACTTCACAAACAGAAGATGGCCAAACAA
TCTCAACAAATGCTATCCAGACTGATACAGCCATTAACCCAGGTAACTCAGGTGGACCACTTATCAATATTCAAGGACAA
GTTATCGGTATCAACTCAAGTAAAATAACCTCTAGTTCTATCAGCAGTTCAGGAGTTGCAGTAGAAGGAATGGGCTTTGC
AATTCCCTCAAATGATACTGTACAGATAATTAATCAATTAGAAACAAATGGTAAAGTTACTCGTCCAGCTCTTGGCGTAC
AAATGGTCAATCTAACAGACCTATCTACTAGTCAATTAGAAAAAGCAGGATTAGCAAATACAGACTTAACATCTGGAGTA
CTAATTGTATCTACTCAATCAGGTTTGCCAGCTGATGGAAAATTTGAACCATATGATGTCATTATTGAAATCGATGGTGA
AACCATTGAAAATAAGAGTGATTTACAAAGTGAACTTTACAAGCATCAAATTGGCGACACCATAACTGTTACCTATTATA
GAAATAATAAGAAAATGACTGTTGACATTAAGTTGACACATTCAACGGATGATTTGTCATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(289-385)

Trypsin-like peptidase domain (Trypsin_2)

(99-244)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.266

100

0.616
  htrA Streptococcus gordonii str. Challis substr. CH1

59.898

100

0.601
  htrA Streptococcus pneumoniae Rx1

58.418

99.746

0.583
  htrA Streptococcus pneumoniae TIGR4

58.418

99.746

0.583
  htrA Streptococcus pneumoniae D39

58.418

99.746

0.583
  htrA Streptococcus pneumoniae R6

58.418

99.746

0.583
  htrA Streptococcus mitis NCTC 12261

57.908

99.746

0.578

Multiple sequence alignment