Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACFKHJ_RS10695 Genome accession   NZ_CP170759
Coordinates   2053870..2054628 (+) Length   252 a.a.
NCBI ID   WP_171989297.1    Uniprot ID   -
Organism   Streptococcus parasuis strain FZ1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2048870..2059628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFKHJ_RS10680 - 2051264..2051947 (-) 684 WP_171989295.1 YoaK family protein -
  ACFKHJ_RS10685 rlmH 2051954..2052433 (-) 480 WP_239604380.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACFKHJ_RS10690 htrA 2052626..2053807 (+) 1182 WP_392452687.1 S1C family serine protease Regulator
  ACFKHJ_RS10695 spo0J 2053870..2054628 (+) 759 WP_171989297.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28969.39 Da        Isoelectric Point: 9.4765

>NTDB_id=1059240 ACFKHJ_RS10695 WP_171989297.1 2053870..2054628(+) (spo0J) [Streptococcus parasuis strain FZ1]
MEELHYLKIKDIQANPYQPRLHFDEEKLLELAQSIKENGVIQPIIVRRSPLIGFELLAGERRLRASQLAGLTEIPAVIKH
LSDDDLLYQAIIENLQRSDLNPIEEAHSYEKLIKKGLTHDEIAQIMGKSRPYITNLLRLLHLSESTRQAVETGKITQGHA
RQLVALSERQQAEWVQKIQEKDISVRQLETILSSKKKKTIRKSNQFVAEEEEKLAKLLGTKVTIQQKKNGSGQLTIQFQN
IEEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1059240 ACFKHJ_RS10695 WP_171989297.1 2053870..2054628(+) (spo0J) [Streptococcus parasuis strain FZ1]
ATGGAAGAACTACACTATCTCAAAATAAAAGACATTCAGGCCAATCCCTATCAACCAAGATTGCATTTTGATGAAGAAAA
ATTATTGGAATTAGCTCAATCTATCAAAGAAAATGGCGTCATTCAACCTATTATTGTTCGCAGATCACCGCTGATTGGTT
TTGAGTTACTTGCTGGTGAAAGACGATTAAGAGCTAGTCAACTAGCGGGATTAACAGAGATTCCAGCAGTCATCAAGCAT
CTATCTGATGATGATTTACTCTACCAAGCTATCATAGAAAACTTACAACGCTCTGACCTCAATCCTATTGAAGAGGCTCA
TTCCTACGAAAAGTTGATAAAAAAAGGCTTAACACATGATGAGATTGCCCAAATCATGGGAAAATCACGACCATATATCA
CTAATCTTCTTCGTTTACTCCATTTATCCGAATCTACGAGGCAAGCAGTAGAAACAGGAAAAATCACACAAGGGCATGCT
AGACAGCTAGTAGCACTATCAGAGAGACAACAAGCAGAATGGGTTCAAAAAATCCAAGAAAAGGATATCAGCGTACGACA
GTTAGAAACAATACTATCCTCTAAAAAGAAAAAAACAATTAGAAAATCCAACCAATTTGTTGCAGAAGAAGAAGAGAAAT
TAGCAAAACTACTTGGAACCAAGGTAACAATCCAACAAAAGAAAAATGGATCGGGACAACTGACTATTCAATTTCAAAAC
ATCGAAGAATTTGAAAGAATTATCAACAGTCTGAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.941

100

0.552

Multiple sequence alignment