Detailed information NTG1059182

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ACFKHJ_RS00350
• Genome accession: NZ_CP170759
• Coordinates: 57437..59590 (+)
• Length: 717 a.a.
• NCBI ID: WP_237395556.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain FZ1
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 52437..64590

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFKHJ_RS00315	-	52658..52894 (+)	237	WP_277943468.1	hypothetical protein	-
ACFKHJ_RS00320	-	52896..53090 (+)	195	WP_349717022.1	DUF6900 domain-containing protein	-
ACFKHJ_RS00325	-	53074..53262 (+)	189	WP_253952793.1	DUF5049 domain-containing protein	-
ACFKHJ_RS00330	-	53526..53978 (+)	453	WP_277943467.1	hypothetical protein	-
ACFKHJ_RS00335	-	54046..55397 (+)	1352	WP_392453212.1	IS3 family transposase	-
ACFKHJ_RS00340	-	56465..56617 (+)	153	WP_079269043.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
ACFKHJ_RS00345	-	56804..56965 (+)	162	WP_172006749.1	hypothetical protein	-
ACFKHJ_RS00350	comA	57437..59590 (+)	2154	WP_237395556.1	peptide cleavage/export ABC transporter ComA	Regulator
ACFKHJ_RS00355	comB	59602..60954 (+)	1353	WP_392452714.1	bacteriocin secretion accessory protein	Regulator
ACFKHJ_RS00360	-	61342..61521 (+)	180	WP_024392853.1	hypothetical protein	-
ACFKHJ_RS00365	-	61522..61722 (+)	201	WP_239604410.1	hypothetical protein	-
ACFKHJ_RS00370	-	61739..61930 (+)	192	WP_024392851.1	hypothetical protein	-
ACFKHJ_RS00375	-	62289..63158 (-)	870	WP_392452716.1	cysteine ABC transporter substrate-binding protein	-
ACFKHJ_RS00380	-	63171..63917 (-)	747	WP_172036451.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 81122.37 Da
• Isoelectric Point: 7.0405

>NTDB_id=1059182 ACFKHJ_RS00350 WP_237395556.1 57437..59590(+) (comA) [Streptococcus parasuis strain FZ1]
MKFGKRHYRAQVDTRDCGVAALAMILEYYRSHHSLASLREMAKTTMEGTTAFGLVKVAEELGFETRAIKADMSLFSMREA
VYPFIAHVVKDGTLLHYYVVIGADKKYIYIADPDPSVKLTKLSHEQFEKEWTGVSLFMAPKPEYQPHKEKSHGLLSFIPL
LTKQKGLITNIVLATLLVTFINIVGSYYLQSIIDTYVPNQMKTTLGVISVGLVVVYALQQLLSYSQEYLLIILGQRLSID
VILSYIRHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSIVVVVSVVLFSQNVYLFFISLLALPIYTL
IIFAFMKPFEKMNQEVMESNAILSSSIIEDINGIETIKSLTSEKQRYQKIDREFVDYLQKSFAYNKAEGQQKVLKRLAQL
VLNVAILWLGACLVMDQKMTLGQLITFNTLLVYFTNPLENIINLQTKLQTAQVANTRLNEVYLVESEFAEKKSVTDLSLL
SGDIECNKVHYKYGYGRDVLTDINLKIKRGEKVSFVGVSGSGKTTLAKMMVDFYDPYKGEIRLNNVNINQIDKQTLRQHI
NYLPQQPYVFNGTILENLLLGAKEGTSQEDILWAVEMACIREDIEKMPLNYQTELTSDGAGISGGQRQRIALARALLTDA
PIMILDEATSSLDILTEKRIVDNLLSLDKTLIFIAHRLTIAERTEHIVVLDKGRIVEQGSHKELLDKQGFYEYLVNS

Nucleotide

• Length: 2154 bp

>NTDB_id=1059182 ACFKHJ_RS00350 WP_237395556.1 57437..59590(+) (comA) [Streptococcus parasuis strain FZ1]
ATGAAATTTGGAAAACGTCATTATAGAGCACAAGTAGATACACGAGACTGTGGTGTAGCAGCGCTTGCTATGATCTTGGA
ATATTATCGTTCTCATCATTCTTTAGCAAGTTTGCGAGAAATGGCAAAGACAACTATGGAAGGCACGACAGCATTTGGTT
TAGTAAAGGTTGCTGAAGAGCTAGGGTTTGAGACGCGTGCGATTAAGGCAGATATGTCTTTGTTTTCGATGAGGGAAGCG
GTCTATCCTTTCATTGCCCATGTGGTAAAAGATGGCACGTTACTACATTATTATGTTGTCATTGGGGCAGATAAGAAATA
TATCTATATTGCAGACCCGGATCCATCAGTGAAATTAACAAAGTTATCCCATGAACAATTTGAAAAGGAGTGGACAGGAG
TTTCGCTATTCATGGCTCCCAAACCGGAATATCAACCTCATAAAGAGAAGAGTCATGGGTTACTTTCTTTCATTCCATTG
TTGACTAAACAAAAGGGATTGATTACAAATATTGTTCTCGCAACGCTCTTGGTTACTTTCATCAACATTGTGGGCTCCTA
TTATTTACAATCCATTATTGACACTTATGTTCCAAATCAGATGAAAACAACATTAGGTGTCATTTCAGTCGGTTTGGTGG
TTGTTTATGCCCTGCAACAATTGTTATCTTATTCCCAAGAGTATTTATTAATCATTCTTGGGCAACGACTCTCTATTGAT
GTGATTTTGTCTTATATTAGACATGTTTTTCATCTACCAATGTCATTTTTTGCTACTCGGCGAACTGGGGAAATTGTTTC
ACGATTTACAGATGCCAATTCTATTATTGATGCTTTAGCTAGTACCATTCTATCAATATTTTTGGATGTATCTATTGTTG
TGGTTGTTTCGGTAGTGCTGTTTAGTCAGAATGTCTATCTTTTCTTTATTTCCTTGTTGGCATTGCCAATCTATACTCTA
ATCATTTTTGCGTTTATGAAACCATTTGAAAAGATGAATCAAGAAGTGATGGAAAGTAATGCAATTCTTTCTTCGTCTAT
TATTGAAGATATTAATGGTATTGAAACCATAAAATCATTGACAAGTGAGAAACAACGTTATCAGAAAATTGATAGAGAAT
TTGTAGATTATTTACAAAAATCATTTGCATACAACAAGGCCGAAGGGCAGCAAAAAGTGTTAAAGCGCTTGGCCCAACTC
GTATTAAATGTAGCAATTCTTTGGTTAGGAGCCTGTCTTGTTATGGATCAGAAAATGACTTTGGGGCAGCTAATCACCTT
CAATACGTTATTGGTCTATTTCACGAATCCATTGGAAAATATAATCAATTTACAAACAAAACTACAGACAGCTCAAGTTG
CCAATACCCGCTTGAACGAGGTCTATTTGGTTGAATCGGAATTTGCTGAAAAGAAATCCGTGACGGACCTTTCGTTACTT
TCGGGGGATATTGAATGCAACAAAGTGCATTATAAATATGGCTATGGTAGGGATGTTTTGACAGATATTAATTTGAAAAT
TAAACGAGGGGAAAAGGTCTCCTTTGTTGGAGTTTCTGGTTCTGGGAAGACGACGTTGGCTAAAATGATGGTGGATTTTT
ATGACCCTTACAAGGGTGAGATTCGATTAAATAATGTCAACATTAATCAAATCGATAAGCAAACACTTCGTCAGCATATT
AATTATCTTCCACAGCAACCCTATGTTTTTAATGGGACAATTCTCGAAAATCTATTGCTAGGTGCAAAAGAGGGAACAAG
TCAAGAAGATATCTTGTGGGCTGTTGAAATGGCATGTATTAGAGAAGATATTGAAAAAATGCCACTGAATTACCAAACGG
AATTGACTTCTGATGGAGCTGGAATCTCCGGTGGACAACGGCAGCGAATTGCCTTGGCGCGTGCCCTTCTTACGGATGCC
CCTATTATGATTTTGGATGAGGCAACCAGTAGTCTGGATATTTTGACAGAGAAGCGTATTGTGGACAACCTATTGTCATT
GGACAAAACTCTAATTTTTATTGCACATCGGTTAACCATTGCAGAGCGTACTGAACATATTGTTGTGCTAGATAAGGGAA
GAATTGTAGAACAAGGGAGTCATAAGGAATTGTTAGACAAGCAAGGGTTCTATGAATATTTAGTAAATAGTTAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (500-650)

• ABC transporter transmembrane region (ABC_membrane) (170-438)

• Peptidase C39 family (Peptidase_C39) (7-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus pneumoniae Rx1	79.637	100	0.796
comA	Streptococcus pneumoniae D39	79.637	100	0.796
comA	Streptococcus pneumoniae R6	79.637	100	0.796
comA	Streptococcus mitis NCTC 12261	79.498	100	0.795
comA	Streptococcus pneumoniae TIGR4	79.358	100	0.794
comA	Streptococcus mitis SK321	79.358	100	0.794
comA	Streptococcus gordonii str. Challis substr. CH1	77.266	100	0.773
comA/nlmT	Streptococcus mutans UA159	63.459	100	0.635