Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACFU5E_RS04125 | Genome accession | NZ_CP170577 |
| Coordinates | 846776..847096 (-) | Length | 106 a.a. |
| NCBI ID | WP_042866149.1 | Uniprot ID | A0AAW7I6F3 |
| Organism | Aeromonas bestiarum strain S1-4 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 841776..852096
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFU5E_RS04105 (ACFU5E_04105) | - | 842029..842715 (-) | 687 | WP_378081285.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| ACFU5E_RS04110 (ACFU5E_04110) | - | 843114..844085 (+) | 972 | WP_043554002.1 | response regulator | - |
| ACFU5E_RS04115 (ACFU5E_04115) | - | 844160..845557 (-) | 1398 | WP_042866150.1 | peptide MFS transporter | - |
| ACFU5E_RS04120 (ACFU5E_04120) | galU | 845771..846682 (-) | 912 | WP_043135330.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACFU5E_RS04125 (ACFU5E_04125) | comEA | 846776..847096 (-) | 321 | WP_042866149.1 | ComEA family DNA-binding protein | Machinery gene |
| ACFU5E_RS04130 (ACFU5E_04130) | cysQ | 847263..848033 (+) | 771 | WP_378081286.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| ACFU5E_RS04135 (ACFU5E_04135) | - | 848123..848419 (-) | 297 | WP_043135321.1 | YciI family protein | - |
| ACFU5E_RS04140 (ACFU5E_04140) | - | 848444..848995 (-) | 552 | WP_378081287.1 | septation protein A | - |
| ACFU5E_RS04145 (ACFU5E_04145) | - | 849110..850615 (-) | 1506 | WP_378081288.1 | pyridoxal-dependent decarboxylase | - |
| ACFU5E_RS04150 (ACFU5E_04150) | - | 850829..851464 (+) | 636 | WP_043135324.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11238.11 Da Isoelectric Point: 9.6863
>NTDB_id=1058087 ACFU5E_RS04125 WP_042866149.1 846776..847096(-) (comEA) [Aeromonas bestiarum strain S1-4]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTANINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTANINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=1058087 ACFU5E_RS04125 WP_042866149.1 846776..847096(-) (comEA) [Aeromonas bestiarum strain S1-4]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTCTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCCACCACAGTCACCACCGCGAAGGAGAGCGGCAAGGTGAACCTGAATACAGCTAATATCAATG
AGTTAACTGCCCTCAAGGGGATCGGCGAGAAGAAGGCCCAGGCCATCGTCGACTTTCGCGAGAAGCAGGGCAAGTTCACC
ACGGTCGAACAACTTGCCGATGTCAGCGGCATAGGGCCGGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTCTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCCACCACAGTCACCACCGCGAAGGAGAGCGGCAAGGTGAACCTGAATACAGCTAATATCAATG
AGTTAACTGCCCTCAAGGGGATCGGCGAGAAGAAGGCCCAGGCCATCGTCGACTTTCGCGAGAAGCAGGGCAAGTTCACC
ACGGTCGAACAACTTGCCGATGTCAGCGGCATAGGGCCGGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
50.909 |
100 |
0.528 |
| comEA | Vibrio cholerae C6706 |
50.909 |
100 |
0.528 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.361 |
91.509 |
0.415 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
62.319 |
65.094 |
0.406 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |