Detailed information NTG1055039

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ACE6HX_RS16450
• Genome accession: NZ_CP170098
• Coordinates: 3191456..3192142 (-)
• Length: 228 a.a.
• NCBI ID: WP_189288297.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain X14-67
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3186456..3197142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE6HX_RS16415 (ACE6HX_16415)	fliW	3186589..3187023 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
ACE6HX_RS16420 (ACE6HX_16420)	-	3187052..3187630 (-)	579	WP_106043905.1	DUF6470 family protein	-
ACE6HX_RS16425 (ACE6HX_16425)	flgL	3187679..3188590 (-)	912	WP_066031682.1	flagellar hook-associated protein FlgL	-
ACE6HX_RS16430 (ACE6HX_16430)	flgK	3188600..3190120 (-)	1521	WP_106036479.1	flagellar hook-associated protein FlgK	-
ACE6HX_RS16435 (ACE6HX_16435)	-	3190136..3190618 (-)	483	WP_034660146.1	flagellar protein FlgN	-
ACE6HX_RS16440 (ACE6HX_16440)	flgM	3190637..3190900 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
ACE6HX_RS16445 (ACE6HX_16445)	-	3190980..3191399 (-)	420	WP_375566417.1	TIGR03826 family flagellar region protein	-
ACE6HX_RS16450 (ACE6HX_16450)	comFC	3191456..3192142 (-)	687	WP_189288297.1	ComF family protein	Machinery gene
ACE6HX_RS16455 (ACE6HX_16455)	-	3192139..3192432 (-)	294	WP_060597398.1	late competence development ComFB family protein	-
ACE6HX_RS16460 (ACE6HX_16460)	comFA	3192499..3193878 (-)	1380	WP_142393514.1	DEAD/DEAH box helicase	Machinery gene
ACE6HX_RS16465 (ACE6HX_16465)	-	3193999..3194841 (-)	843	WP_034660152.1	DegV family protein	-
ACE6HX_RS16470 (ACE6HX_16470)	degU	3195059..3195748 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACE6HX_RS16475 (ACE6HX_16475)	degS	3195813..3196988 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26048.47 Da
• Isoelectric Point: 9.9327

>NTDB_id=1055039 ACE6HX_RS16450 WP_189288297.1 3191456..3192142(-) (comFC) [Bacillus pumilus strain X14-67]
MICLICEGHFVAAFTWKSLLLLNDDHLCIACKHHLEKIQRPICPACGRAQSNDQLCQDCSRWKERPDSTTVLVKNRSVYA
YNDLMKDVLSRFKFRGDTALAELFKQDVQAVFKRSFSIKEPVLIPIPLSKERLKERGFNQSVILASLIGQPILQPLVKIH
QSKQSKKKKNERLDQKRMFQIKQTDAIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=1055039 ACE6HX_RS16450 WP_189288297.1 3191456..3192142(-) (comFC) [Bacillus pumilus strain X14-67]
TTGATCTGCCTAATTTGTGAGGGGCATTTTGTCGCTGCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCATCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCTTGTGGGAGAGCACAGTCGAATGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCCTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTTTATGCT
TACAACGATTTGATGAAAGATGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCAAGCAGTATTTAAGCGCTCCTTTTCAATTAAAGAACCTGTGCTGATCCCGATTCCTTTAAGTAAAGAAAGGCTAA
AGGAAAGAGGGTTTAATCAGTCAGTCATACTTGCTTCCTTGATTGGTCAGCCGATCCTGCAGCCGCTTGTGAAAATACAT
CAAAGCAAGCAGTCTAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAAGAATGTTTCAAATCAAGCAGACAGATGCGAT
CGTTCAAAGGGATGTTATCTTAATTGACGACATCTATACAACGGGGGCCACCATTTATGATGCGGCAAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (156-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.435	100	0.509
comFC/cflB	Streptococcus mitis NCTC 12261	39.301	100	0.395
comFC/cflB	Streptococcus mitis SK321	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae Rx1	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae D39	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae R6	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae TIGR4	39.301	100	0.395