Detailed information NTG1055042

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACE6HX_RS16475
• Genome accession: NZ_CP170098
• Coordinates: 3195813..3196988 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain X14-67
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3190813..3201988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE6HX_RS16445 (ACE6HX_16445)	-	3190980..3191399 (-)	420	WP_375566417.1	TIGR03826 family flagellar region protein	-
ACE6HX_RS16450 (ACE6HX_16450)	comFC	3191456..3192142 (-)	687	WP_189288297.1	ComF family protein	Machinery gene
ACE6HX_RS16455 (ACE6HX_16455)	-	3192139..3192432 (-)	294	WP_060597398.1	late competence development ComFB family protein	-
ACE6HX_RS16460 (ACE6HX_16460)	comFA	3192499..3193878 (-)	1380	WP_142393514.1	DEAD/DEAH box helicase	Machinery gene
ACE6HX_RS16465 (ACE6HX_16465)	-	3193999..3194841 (-)	843	WP_034660152.1	DegV family protein	-
ACE6HX_RS16470 (ACE6HX_16470)	degU	3195059..3195748 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACE6HX_RS16475 (ACE6HX_16475)	degS	3195813..3196988 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
ACE6HX_RS16480 (ACE6HX_16480)	-	3197210..3197878 (+)	669	WP_012011434.1	YigZ family protein	-
ACE6HX_RS16485 (ACE6HX_16485)	-	3197863..3198954 (+)	1092	WP_106048170.1	LCP family protein	-
ACE6HX_RS16490 (ACE6HX_16490)	-	3198991..3200058 (-)	1068	WP_034660156.1	glycosyltransferase family 4 protein	-
ACE6HX_RS16495 (ACE6HX_16495)	-	3200193..3201389 (-)	1197	WP_223253287.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=1055042 ACE6HX_RS16475 WP_003213166.1 3195813..3196988(-) (degS) [Bacillus pumilus strain X14-67]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1055042 ACE6HX_RS16475 WP_003213166.1 3195813..3196988(-) (degS) [Bacillus pumilus strain X14-67]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTCGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAATCTACAAGTGGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTGTCCCGGGA
AATTCATGACGGTCCGGCCCAGATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATTACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841