Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABUS10_RS01500 | Genome accession | NZ_CP169869 |
| Coordinates | 324079..324507 (+) | Length | 142 a.a. |
| NCBI ID | WP_000993713.1 | Uniprot ID | A0A6F8TC45 |
| Organism | Acinetobacter baumannii strain Up280 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 319079..329507
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS10_RS01480 | - | 320470..321357 (+) | 888 | WP_001017317.1 | metal-dependent hydrolase | - |
| ABUS10_RS01485 | - | 321488..322078 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| ABUS10_RS01490 | - | 322100..323182 (+) | 1083 | WP_001246387.1 | YgcG family protein | - |
| ABUS10_RS01495 | - | 323176..323736 (+) | 561 | WP_000258951.1 | TPM domain-containing protein | - |
| ABUS10_RS01500 | pilA | 324079..324507 (+) | 429 | WP_000993713.1 | pilin | Machinery gene |
| ABUS10_RS01505 | - | 324563..325873 (+) | 1311 | WP_199947831.1 | O-antigen ligase | - |
| ABUS10_RS01510 | - | 325981..327609 (+) | 1629 | WP_199947833.1 | PglL family O-oligosaccharyltransferase | - |
| ABUS10_RS01515 | bfr | 327650..328114 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| ABUS10_RS01520 | - | 328359..328553 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABUS10_RS01525 | - | 328763..329146 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14515.55 Da Isoelectric Point: 6.1941
>NTDB_id=1053845 ABUS10_RS01500 WP_000993713.1 324079..324507(+) (pilA) [Acinetobacter baumannii strain Up280]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
Nucleotide
Download Length: 429 bp
>NTDB_id=1053845 ABUS10_RS01500 WP_000993713.1 324079..324507(+) (pilA) [Acinetobacter baumannii strain Up280]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
92.254 |
100 |
0.923 |
| pilA | Acinetobacter baumannii strain A118 |
44.828 |
100 |
0.458 |
| pilA | Pseudomonas aeruginosa PAK |
41.497 |
100 |
0.43 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae strain A1552 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae C6706 |
40.411 |
100 |
0.415 |