Detailed information NTG1051739

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ACEYXE_RS12180
• Genome accession: NZ_CP169521
• Coordinates: 2481995..2482609 (-)
• Length: 204 a.a.
• NCBI ID: WP_012118026.1
• Uniprot ID: A7Z6X3
• Organism: Bacillus velezensis strain SZ-T8
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2476995..2487609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEYXE_RS12150 (ACEYXE_12150)	rpsT	2477298..2477564 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
ACEYXE_RS12155 (ACEYXE_12155)	holA	2477581..2478622 (-)	1042	Protein_2346	DNA polymerase III subunit delta	-
ACEYXE_RS12160 (ACEYXE_12160)	-	2478662..2478813 (-)	152	Protein_2347	hypothetical protein	-
ACEYXE_RS12165 (ACEYXE_12165)	-	2478854..2478988 (+)	135	WP_003152870.1	YqzM family protein	-
ACEYXE_RS12170 (ACEYXE_12170)	comEC	2479007..2481358 (-)	2352	WP_012118025.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACEYXE_RS12175 (ACEYXE_12175)	-	2481359..2481928 (-)	570	WP_003152868.1	ComE operon protein 2	-
ACEYXE_RS12180 (ACEYXE_12180)	comEA	2481995..2482609 (-)	615	WP_012118026.1	helix-hairpin-helix domain-containing protein	Machinery gene
ACEYXE_RS12185 (ACEYXE_12185)	comER	2482668..2483489 (+)	822	WP_012118027.1	late competence protein ComER	-
ACEYXE_RS12190 (ACEYXE_12190)	-	2483558..2484295 (-)	738	WP_012118028.1	class I SAM-dependent methyltransferase	-
ACEYXE_RS12195 (ACEYXE_12195)	rsfS	2484292..2484648 (-)	357	WP_007408260.1	ribosome silencing factor	-
ACEYXE_RS12200 (ACEYXE_12200)	yqeK	2484665..2485225 (-)	561	WP_012118029.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ACEYXE_RS12205 (ACEYXE_12205)	-	2485215..2485784 (-)	570	WP_012118030.1	nicotinate-nucleotide adenylyltransferase	-
ACEYXE_RS12210 (ACEYXE_12210)	yhbY	2485795..2486085 (-)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
ACEYXE_RS12215 (ACEYXE_12215)	aroE	2486079..2486921 (-)	843	WP_012118031.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22195.40 Da
• Isoelectric Point: 6.4888

>NTDB_id=1051739 ACEYXE_RS12180 WP_012118026.1 2481995..2482609(-) (comEA) [Bacillus velezensis strain SZ-T8]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTAADKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINMASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=1051739 ACEYXE_RS12180 WP_012118026.1 2481995..2482609(-) (comEA) [Bacillus velezensis strain SZ-T8]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGTATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACCGCAGCCGATAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGGGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATATGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (68-122)

• Helix-hairpin-helix motif (HHH_3) (141-202)

3D structure

• AlphaFold DB: A7Z6X3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.333	94.118	0.549
comEA	Latilactobacillus sakei subsp. sakei 23K	32.328	100	0.368
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae D39	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae R6	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363