Detailed information NTG1051062

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACEWX4_RS07350
• Genome accession: NZ_CP169369
• Coordinates: 1530621..1531814 (-)
• Length: 397 a.a.
• NCBI ID: WP_374855817.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain AIBD14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1525621..1536814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEWX4_RS07330 (ACEWX4_07330)	-	1527101..1527550 (+)	450	WP_016658087.1	MaoC family dehydratase	-
ACEWX4_RS07335 (ACEWX4_07335)	-	1527654..1528682 (+)	1029	WP_374855766.1	AraC family transcriptional regulator ligand-binding domain-containing protein	-
ACEWX4_RS07340 (ACEWX4_07340)	gcvH	1528751..1529125 (+)	375	WP_005178176.1	glycine cleavage system protein GcvH	-
ACEWX4_RS07345 (ACEWX4_07345)	-	1529381..1530562 (+)	1182	WP_016658086.1	MFS transporter	-
ACEWX4_RS07350 (ACEWX4_07350)	pilU	1530621..1531814 (-)	1194	WP_374855817.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACEWX4_RS07355 (ACEWX4_07355)	-	1532068..1533123 (-)	1056	WP_374855768.1	3-deoxy-7-phosphoheptulonate synthase	-
ACEWX4_RS07360 (ACEWX4_07360)	hppD	1533998..1535056 (+)	1059	WP_016658083.1	4-hydroxyphenylpyruvate dioxygenase	-
ACEWX4_RS07365 (ACEWX4_07365)	-	1535208..1536590 (+)	1383	WP_005178192.1	amino acid permease	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44702.08 Da
• Isoelectric Point: 6.2356

>NTDB_id=1051062 ACEWX4_RS07350 WP_374855817.1 1530621..1531814(-) (pilU) [Acinetobacter indicus strain AIBD14]
MYSAELLEDARKFMFHMLSKVVEFGGSDLFITADFPPSIKHQGMMKALGQQALTTEKTKLFAYSLMNEKQRSEFETDLEC
NFAISVPEVSRFRVNVFQQQLHVGMVIRTISAEIPNFSQLKLPESLKHIIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGKGRRAAVEIMLNTPLISELILKGQFHELKSIMGKS
RELGMQTFDQALFDLYNEGAISYEEAIRNADSMNELRLQIKLKSNRPSEASAAMSFSMLEEPKPEDEDTESAPQQSA

Nucleotide

• Length: 1194 bp

>NTDB_id=1051062 ACEWX4_RS07350 WP_374855817.1 1530621..1531814(-) (pilU) [Acinetobacter indicus strain AIBD14]
ATGTACAGTGCAGAATTACTCGAAGATGCGCGTAAGTTTATGTTTCATATGCTCAGCAAAGTGGTTGAATTTGGGGGATC
AGATTTATTTATTACCGCGGATTTTCCACCGAGCATTAAACATCAGGGCATGATGAAAGCGCTGGGACAACAGGCGCTGA
CCACAGAAAAAACCAAGCTGTTTGCCTACAGCCTCATGAATGAAAAACAGCGTAGCGAGTTTGAAACTGATCTGGAATGC
AACTTTGCCATTAGTGTGCCGGAGGTATCGCGTTTTCGGGTCAATGTGTTTCAACAGCAGCTGCATGTCGGGATGGTGAT
TCGAACCATTAGCGCGGAAATTCCAAATTTTAGCCAGCTGAAACTGCCGGAATCACTGAAGCATATTATTATGGAAAAGC
GCGGTCTGGTGCTGGTGGTGGGGGGAACCGGTTCAGGTAAATCGACCTCTTTGGCGGCGATGATTGATCATCGTAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGACCCGGTGGAATATGTGCACAAGCATAAAAAGTCGATGATTACCCATCG
TGAAGTCGGGGTCGACAGCCATTCCTGGCACAATGCGCTGAAAAATACCTTACGTCAGGCACCGGATGTGATTTTAATTG
GCGAGATCCGCGACACCGAAACCATGGAACATGCGATTGCCTTTGCTGAAACCGGGCATTTATGTTTGGGCACCTTGCAT
GCCAATAACGCCAACCAGACGCTGGACCGGATTATCAACTTTTTCCCGGAAGAGCGCCGTAACCAGTTGCTGATGGATCT
GTCGTCCAATATGAAGGCCATTATTTCCCAGCGTCTGGTGCGTACCGAAGATGGTAAAGGCCGCCGTGCGGCAGTCGAGA
TTATGCTGAATACGCCGCTGATTTCTGAACTGATTTTAAAAGGCCAGTTCCATGAGTTAAAGTCGATTATGGGCAAATCG
CGTGAACTGGGCATGCAGACGTTTGATCAGGCTCTATTTGATTTGTATAACGAAGGCGCGATTTCCTATGAAGAAGCAAT
TCGTAATGCCGATTCGATGAATGAATTGCGCTTACAGATTAAATTGAAAAGTAACCGGCCAAGCGAAGCTTCGGCAGCTA
TGAGCTTTAGCATGCTGGAAGAGCCAAAACCGGAAGATGAAGATACGGAATCTGCTCCTCAACAGAGTGCTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.568	93.199	0.537
pilU	Acinetobacter baylyi ADP1	54.42	91.184	0.496
pilU	Vibrio cholerae strain A1552	52.367	85.139	0.446
pilT	Acinetobacter nosocomialis M2	43.939	83.123	0.365
pilT	Acinetobacter baumannii D1279779	43.939	83.123	0.365
pilT	Acinetobacter baumannii strain A118	43.939	83.123	0.365