Detailed information NTG1044273

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: QOR59_RS01110
• Genome accession: NZ_OX460985
• Coordinates: 189942..190403 (+)
• Length: 153 a.a.
• NCBI ID: WP_001874060.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-307
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 184942..195403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR59_RS01080	-	186557..186922 (+)	366	WP_000285373.1	DUF1033 family protein	-
QOR59_RS01085	comGA	187095..188066 (+)	972	WP_000250808.1	competence type IV pilus ATPase ComGA	Machinery gene
QOR59_RS01090	comGB	187960..189003 (+)	1044	WP_223295592.1	competence type IV pilus assembly protein ComGB	Machinery gene
QOR59_RS01095	comGC/cglC	189000..189329 (+)	330	WP_000793380.1	competence type IV pilus major pilin ComGC	Machinery gene
QOR59_RS01100	comGD	189304..189717 (+)	414	WP_000244259.1	competence type IV pilus minor pilin ComGD	Machinery gene
QOR59_RS01105	comGE	189689..189988 (+)	300	WP_001867089.1	competence type IV pilus minor pilin ComGE	Machinery gene
QOR59_RS01110	comGF	189942..190403 (+)	462	WP_001874060.1	competence type IV pilus minor pilin ComGF	Machinery gene
QOR59_RS01115	comGG	190381..190752 (+)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
QOR59_RS01120	comGH	190867..191841 (+)	975	WP_001008570.1	class I SAM-dependent methyltransferase	Machinery gene
QOR59_RS01125	-	191873..193066 (+)	1194	WP_000047535.1	acetate kinase	-
QOR59_RS01130	-	193217..193423 (+)	207	WP_000798242.1	helix-turn-helix transcriptional regulator	-
QOR59_RS01135	-	193482..193619 (+)	138	WP_001867090.1	hypothetical protein	-
QOR59_RS01140	-	193660..194115 (+)	456	WP_000905674.1	hypothetical protein	-
QOR59_RS01145	-	194184..194849 (+)	666	WP_000008111.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17861.86 Da
• Isoelectric Point: 9.8392

>NTDB_id=1044273 QOR59_RS01110 WP_001874060.1 189942..190403(+) (comGF) [Streptococcus agalactiae isolate MRI Z2-307]
MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=1044273 QOR59_RS01110 WP_001874060.1 189942..190403(+) (comGF) [Streptococcus agalactiae isolate MRI Z2-307]
TTGAAGGTAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACGCTTTTAGAATGTTTGGTAGCATT
GGTTACAATCACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTCGAAGGCGCTCACTTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAAACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.887	92.81	0.444
comGF	Streptococcus mutans UA140	47.887	92.81	0.444
comGF/cglF	Streptococcus pneumoniae Rx1	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae D39	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae R6	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae TIGR4	43.165	90.85	0.392
comGF/cglF	Streptococcus mitis SK321	44.03	87.582	0.386
comGF/cglF	Streptococcus mitis NCTC 12261	43.284	87.582	0.379
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373