Detailed information NTG1044269

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACEPXG_RS10955
• Genome accession: NZ_CP168496
• Coordinates: 2266589..2269006 (-)
• Length: 805 a.a.
• NCBI ID: WP_391202067.1
• Uniprot ID: -
• Organism: Psychrobacillus sp. L4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2261589..2274006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEPXG_RS10935 (ACEPXG_10935)	-	2262444..2262740 (-)	297	WP_391202060.1	DUF1292 domain-containing protein	-
ACEPXG_RS10940 (ACEPXG_10940)	ruvX	2262752..2263171 (-)	420	WP_151700429.1	Holliday junction resolvase RuvX	-
ACEPXG_RS10945 (ACEPXG_10945)	-	2263174..2263440 (-)	267	WP_151700430.1	IreB family regulatory phosphoprotein	-
ACEPXG_RS10950 (ACEPXG_10950)	alaS	2263653..2266286 (-)	2634	WP_391202064.1	alanine--tRNA ligase	-
ACEPXG_RS10955 (ACEPXG_10955)	recD2	2266589..2269006 (-)	2418	WP_391202067.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACEPXG_RS10960 (ACEPXG_10960)	-	2269146..2269802 (-)	657	WP_391202070.1	tetratricopeptide repeat protein	-
ACEPXG_RS10965 (ACEPXG_10965)	mnmA	2269816..2270892 (-)	1077	WP_391209884.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACEPXG_RS10970 (ACEPXG_10970)	-	2270954..2272090 (-)	1137	WP_391202073.1	cysteine desulfurase family protein	-
ACEPXG_RS10975 (ACEPXG_10975)	cymR	2272104..2272526 (-)	423	WP_391202077.1	cysteine metabolism transcriptional regulator CymR	-
ACEPXG_RS10980 (ACEPXG_10980)	-	2272708..2273994 (+)	1287	WP_391202080.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90579.24 Da
• Isoelectric Point: 5.5313

>NTDB_id=1044269 ACEPXG_RS10955 WP_391202067.1 2266589..2269006(-) (recD2) [Psychrobacillus sp. L4]
MTNEMNNEKQFITGRPIVSIFHNPQNLFSIIKLKIKSTNTTYIEKEIIVTGYFPQLVLEESYKFTGLVKNHPKYGVQFQV
ETFQKEVPATEQGIVHYLSSDMFPGIGRKTAEQIVKKLGQNAINRILDDPAVLDIIPRLAEDKKQTLRAVLEQNLGLEKV
MIQLNEWGFGPQIAMKIYQAYREETIDVLTKNPYRLIEEVEGVGFIRADELGYKLGIQGNHPDRIKAAIFHLLQSASLSE
GHVFLYAEQLLESVKRLLESAQREEITFEAITKCCFELAEESRIIGEVNRFYIPSLYFSEVGISSKIETLLNENDTHHKF
PLAEMKKHLGGIEERLGVQYATTQVKAIETAINASMTLLTGGPGTGKTTVVRGIVELYAELHGLSLEPKEWAKDKKPFPV
VLAAPTGRAAKRLSESTGLPAMTIHRLLGFNGQEDADSEGKEIEGKLIIIDETSMLDTWLGHQLLKAIPKDAQVIFVGDQ
DQLPPVGPGQVLKDLLASKRIPTVELIDIYRQSEGSSIIELAHEMKKGTVPQTLLDKTKDRSFIKASTEQIPKVVEQVLK
SALAKGHSIRDIQVLAPMYRGPAGIDALNKMMQEMVNPNTDGKRKEMIFGETIYRIGDKVLQLVNQPESNVFNGDMGEVV
SIFKAAETVEKKEMLVISFDGNEVTYEKNDLNQITLAYCCSVHKSQGSEFQTVIMPVTRSYMKMLRRNLLYTGITRAKNF
LILCGDPEVFKFGVERTDDLQRLTTLKDRLTVSEENKEKIDEQREKVMDEITTETTFLSAENCHLIDPLTGMNGISPYDF
LEMDN

Nucleotide

• Length: 2418 bp

>NTDB_id=1044269 ACEPXG_RS10955 WP_391202067.1 2266589..2269006(-) (recD2) [Psychrobacillus sp. L4]
ATGACAAACGAAATGAATAATGAAAAACAATTTATTACGGGTCGTCCTATCGTCTCAATTTTTCACAATCCCCAAAATTT
GTTTTCCATTATAAAACTAAAAATTAAATCCACTAATACAACCTACATAGAAAAAGAAATAATTGTAACCGGTTATTTTC
CACAACTCGTATTAGAAGAATCATATAAATTTACTGGACTTGTAAAAAATCACCCTAAATATGGCGTGCAATTTCAAGTA
GAGACCTTTCAAAAAGAAGTTCCTGCTACCGAACAAGGTATAGTCCATTATTTATCGAGTGATATGTTTCCTGGAATCGG
CAGAAAAACAGCTGAACAAATTGTCAAAAAACTTGGTCAAAATGCCATCAATAGAATTCTAGATGACCCTGCTGTATTGG
ACATCATTCCAAGATTGGCAGAAGATAAAAAACAAACATTGAGAGCTGTTTTAGAACAAAATCTTGGCTTAGAAAAAGTG
ATGATTCAGTTGAATGAATGGGGGTTCGGTCCGCAAATCGCGATGAAAATATATCAAGCTTACCGAGAGGAAACGATTGA
TGTATTGACAAAGAACCCATATCGCCTTATCGAGGAAGTGGAAGGCGTTGGATTTATTCGGGCAGATGAACTGGGCTATA
AACTTGGCATTCAAGGAAATCACCCTGATCGTATTAAAGCTGCCATTTTTCACTTATTGCAATCTGCATCATTAAGTGAA
GGTCATGTATTTTTATATGCGGAGCAATTACTTGAATCTGTTAAAAGATTATTAGAAAGTGCACAAAGAGAAGAAATCAC
TTTCGAAGCGATAACGAAGTGCTGCTTCGAACTAGCCGAGGAAAGTCGAATTATTGGGGAAGTGAATCGTTTTTACATCC
CTTCACTCTATTTTTCAGAAGTAGGGATAAGTTCTAAAATCGAAACGTTATTGAATGAAAATGATACTCATCATAAATTC
CCCCTTGCAGAGATGAAAAAACACCTTGGAGGAATTGAAGAAAGATTAGGCGTCCAATATGCAACAACACAAGTTAAAGC
GATCGAAACGGCTATAAATGCCAGCATGACTCTCTTAACAGGTGGACCTGGGACAGGGAAGACCACCGTCGTACGAGGAA
TAGTTGAATTATATGCAGAACTTCATGGACTTTCTTTAGAACCAAAAGAATGGGCAAAAGATAAAAAACCATTTCCTGTT
GTACTGGCTGCACCCACTGGTAGAGCCGCAAAACGTTTAAGCGAATCTACCGGATTGCCAGCAATGACAATCCACCGCTT
ATTAGGGTTTAACGGCCAGGAAGATGCGGATTCTGAAGGAAAAGAAATTGAAGGAAAATTAATCATTATAGATGAAACTT
CCATGCTAGATACTTGGCTTGGGCATCAATTATTAAAAGCTATTCCAAAAGATGCTCAAGTCATTTTTGTAGGGGACCAA
GACCAGTTACCTCCTGTTGGACCAGGGCAGGTTTTAAAAGATTTATTAGCTTCTAAAAGAATCCCAACAGTCGAATTAAT
AGATATTTATCGCCAATCAGAAGGTTCTTCTATAATTGAGCTAGCCCACGAAATGAAAAAAGGAACTGTTCCGCAAACGC
TATTAGACAAGACGAAAGATCGTTCATTTATTAAAGCTTCTACAGAACAAATTCCTAAAGTAGTAGAACAAGTGTTGAAA
AGTGCTTTAGCAAAAGGACATTCGATAAGAGACATTCAAGTACTTGCGCCTATGTATAGAGGACCAGCTGGTATCGATGC
GCTTAATAAAATGATGCAAGAAATGGTGAATCCAAATACAGATGGAAAACGAAAAGAAATGATATTTGGAGAAACGATTT
ACCGTATTGGCGACAAGGTATTGCAGCTTGTCAATCAGCCAGAAAGCAATGTGTTTAACGGAGACATGGGGGAAGTCGTA
AGTATTTTCAAAGCCGCTGAAACAGTGGAGAAAAAGGAAATGCTAGTTATTTCGTTTGATGGCAATGAAGTGACGTATGA
AAAGAATGATTTGAATCAAATTACTTTAGCATATTGTTGCTCCGTGCATAAATCCCAAGGTAGTGAATTTCAAACCGTGA
TTATGCCTGTCACCAGAAGTTATATGAAAATGCTTCGAAGAAATTTATTATATACAGGCATTACAAGAGCAAAGAACTTT
TTAATATTATGTGGAGATCCCGAAGTTTTTAAGTTTGGAGTAGAACGTACCGATGATCTGCAACGATTAACAACGTTAAA
AGATCGATTAACAGTCAGTGAGGAAAATAAGGAAAAAATAGATGAACAGAGAGAAAAAGTTATGGATGAAATAACAACAG
AAACAACTTTCTTATCCGCAGAGAATTGCCATTTAATTGATCCGTTAACCGGGATGAATGGAATTTCCCCATATGATTTC
TTAGAGATGGATAATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

• AAA domain (AAA_30) (340-547)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-656)

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	53.885	99.13	0.534