Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   QOR59_RS01115 Genome accession   NZ_OX460985
Coordinates   190381..190752 (+) Length   123 a.a.
NCBI ID   WP_000601104.1    Uniprot ID   Q8E233
Organism   Streptococcus agalactiae isolate MRI Z2-307     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 185381..195752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR59_RS01080 - 186557..186922 (+) 366 WP_000285373.1 DUF1033 family protein -
  QOR59_RS01085 comGA 187095..188066 (+) 972 WP_000250808.1 competence type IV pilus ATPase ComGA Machinery gene
  QOR59_RS01090 comGB 187960..189003 (+) 1044 WP_223295592.1 competence type IV pilus assembly protein ComGB Machinery gene
  QOR59_RS01095 comGC/cglC 189000..189329 (+) 330 WP_000793380.1 competence type IV pilus major pilin ComGC Machinery gene
  QOR59_RS01100 comGD 189304..189717 (+) 414 WP_000244259.1 competence type IV pilus minor pilin ComGD Machinery gene
  QOR59_RS01105 comGE 189689..189988 (+) 300 WP_001867089.1 competence type IV pilus minor pilin ComGE Machinery gene
  QOR59_RS01110 comGF 189942..190403 (+) 462 WP_001874060.1 competence type IV pilus minor pilin ComGF Machinery gene
  QOR59_RS01115 comGG 190381..190752 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG Machinery gene
  QOR59_RS01120 comGH 190867..191841 (+) 975 WP_001008570.1 class I SAM-dependent methyltransferase Machinery gene
  QOR59_RS01125 - 191873..193066 (+) 1194 WP_000047535.1 acetate kinase -
  QOR59_RS01130 - 193217..193423 (+) 207 WP_000798242.1 helix-turn-helix transcriptional regulator -
  QOR59_RS01135 - 193482..193619 (+) 138 WP_001867090.1 hypothetical protein -
  QOR59_RS01140 - 193660..194115 (+) 456 WP_000905674.1 hypothetical protein -
  QOR59_RS01145 - 194184..194849 (+) 666 WP_000008111.1 type II CAAX endopeptidase family protein -
  QOR59_RS01150 proC 194870..195640 (-) 771 WP_001867096.1 pyrroline-5-carboxylate reductase -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13879.09 Da        Isoelectric Point: 10.0693

>NTDB_id=1044274 QOR59_RS01115 WP_000601104.1 190381..190752(+) (comGG) [Streptococcus agalactiae isolate MRI Z2-307]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=1044274 QOR59_RS01115 WP_000601104.1 190381..190752(+) (comGG) [Streptococcus agalactiae isolate MRI Z2-307]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8E233

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366
  comGG Streptococcus mutans UA159

44.554

82.114

0.366