Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   KJP64_RS03730 Genome accession   NZ_OX419565
Coordinates   722440..723570 (+) Length   376 a.a.
NCBI ID   WP_033885033.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6145     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 717440..728570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP64_RS03705 (NRS6145_03670) - 717742..718047 (-) 306 WP_003242885.1 hypothetical protein -
  KJP64_RS03710 (NRS6145_03675) yezA 718114..718320 (-) 207 WP_003233877.1 bacteriocin immunity protein -
  KJP64_RS03715 (NRS6145_03680) yezG 718560..719015 (-) 456 WP_010886434.1 TIGR01741 family protein -
  KJP64_RS03720 (NRS6145_03685) yeeF 719035..721044 (-) 2010 WP_003242909.1 LXG family T7SS effector deoxyribonuclease toxin YeeF -
  KJP64_RS03725 (NRS6145_03690) - 721256..722278 (+) 1023 WP_003243884.1 hypothetical protein -
  KJP64_RS03730 (NRS6145_03695) rapC 722440..723570 (+) 1131 WP_033885033.1 response regulator aspartate phosphatase RapH Regulator
  KJP64_RS03735 (NRS6145_03700) phrH 723560..723733 (+) 174 WP_003242557.1 phosphatase RapH inhibitor PhrH -
  KJP64_RS03740 (NRS6145_03705) yeeI 723893..724612 (+) 720 WP_003242611.1 YebC/PmpR family DNA-binding transcriptional regulator -
  KJP64_RS03745 (NRS6145_03710) yeeK 724746..725183 (+) 438 WP_003244206.1 spore coat protein YeeK -
  KJP64_RS03750 (NRS6145_03715) yezE 725298..725882 (+) 585 WP_003243181.1 TetR/AcrR family transcriptional regulator -
  KJP64_RS03755 (NRS6145_03720) yesE 725961..726404 (+) 444 WP_069322440.1 nuclear transport factor 2 family protein -
  KJP64_RS03760 (NRS6145_03725) yesF 726401..727249 (+) 849 WP_213380090.1 NAD-dependent epimerase/dehydratase family protein -
  KJP64_RS03765 (NRS6145_03730) cotJA 727396..727644 (+) 249 WP_003219489.1 spore coat-associated protein CotJA -
  KJP64_RS03770 (NRS6145_03735) cotJB 727628..727891 (+) 264 WP_003219491.1 spore coat protein CotJB -
  KJP64_RS03775 (NRS6145_03740) cotJC 727906..728475 (+) 570 WP_003233850.1 spore coat protein CotJC -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 43933.13 Da        Isoelectric Point: 5.7144

>NTDB_id=1039937 KJP64_RS03730 WP_033885033.1 722440..723570(+) (rapC) [Bacillus subtilis isolate NRS6145]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALDLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=1039937 KJP64_RS03730 WP_033885033.1 722440..723570(+) (rapC) [Bacillus subtilis isolate NRS6145]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAAATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGATATTGAGAAAGCCGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTGGACATTTATCAAAACCATCCTCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTAGATTTGGCAACGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCAGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.691

100

0.407
  rapF Bacillus subtilis subsp. subtilis str. 168

40.053

100

0.402

Multiple sequence alignment