Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KJP48_RS21775 Genome accession   NZ_OX419564
Coordinates   4161177..4161971 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis isolate NRS6127     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4156177..4166971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP48_RS21750 (NRS6127_21580) - 4157290..4157973 (-) 684 WP_024573086.1 response regulator transcription factor -
  KJP48_RS21755 (NRS6127_21585) - 4158185..4159084 (+) 900 WP_029726116.1 PepSY domain-containing protein -
  KJP48_RS21760 (NRS6127_21590) - 4159245..4159745 (+) 501 WP_029726115.1 PepSY domain-containing protein -
  KJP48_RS21765 - 4159742..4159872 (-) 131 Protein_4235 hypothetical protein -
  KJP48_RS21770 (NRS6127_21595) htrA 4159893..4161095 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  KJP48_RS21775 (NRS6127_21600) vicX 4161177..4161971 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  KJP48_RS21780 (NRS6127_21605) walI 4161993..4162835 (-) 843 WP_029726114.1 WalRK two-component regulatory system regulator WalI -
  KJP48_RS21785 (NRS6127_21610) walH 4162822..4164189 (-) 1368 WP_029726113.1 WalRK two-component regulatory system regulator WalH -
  KJP48_RS21790 (NRS6127_21615) walK 4164179..4166014 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  KJP48_RS21795 (NRS6127_21620) walR 4166022..4166729 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=1039903 KJP48_RS21775 WP_003226939.1 4161177..4161971(-) (vicX) [Bacillus subtilis isolate NRS6127]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1039903 KJP48_RS21775 WP_003226939.1 4161177..4161971(-) (vicX) [Bacillus subtilis isolate NRS6127]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTTTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment