Detailed information NTG1034769

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB6K15_RS17565
• Genome accession: NZ_CP166492
• Coordinates: 3563074..3563688 (+)
• Length: 204 a.a.
• NCBI ID: WP_043021637.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BC248L1-1
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3558074..3568688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6K15_RS17530 (AB6K15_17520)	aroE	3558761..3559603 (+)	843	WP_094031849.1	shikimate dehydrogenase	-
AB6K15_RS17535 (AB6K15_17525)	yhbY	3559597..3559887 (+)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
AB6K15_RS17540 (AB6K15_17530)	-	3559898..3560467 (+)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
AB6K15_RS17545 (AB6K15_17535)	yqeK	3560457..3561017 (+)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB6K15_RS17550 (AB6K15_17540)	rsfS	3561035..3561391 (+)	357	WP_007408260.1	ribosome silencing factor	-
AB6K15_RS17555 (AB6K15_17545)	-	3561388..3562125 (+)	738	WP_076424998.1	class I SAM-dependent methyltransferase	-
AB6K15_RS17560 (AB6K15_17550)	comER	3562194..3563015 (-)	822	WP_012118027.1	late competence protein ComER	-
AB6K15_RS17565 (AB6K15_17555)	comEA	3563074..3563688 (+)	615	WP_043021637.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB6K15_RS17570 (AB6K15_17560)	-	3563755..3564324 (+)	570	WP_094031848.1	ComE operon protein 2	-
AB6K15_RS17575 (AB6K15_17565)	comEC	3564325..3566676 (+)	2352	WP_094031847.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB6K15_RS17580 (AB6K15_17570)	-	3566695..3566829 (-)	135	WP_003152870.1	YqzM family protein	-
AB6K15_RS17585 (AB6K15_17575)	-	3566870..3567021 (+)	152	Protein_3400	hypothetical protein	-
AB6K15_RS17590 (AB6K15_17580)	holA	3567061..3568102 (+)	1042	Protein_3401	DNA polymerase III subunit delta	-
AB6K15_RS17595 (AB6K15_17585)	rpsT	3568119..3568385 (-)	267	WP_003152876.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22165.31 Da
• Isoelectric Point: 6.4888

>NTDB_id=1034769 AB6K15_RS17565 WP_043021637.1 3563074..3563688(+) (comEA) [Bacillus velezensis strain BC248L1-1]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTAADKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=1034769 AB6K15_RS17565 WP_043021637.1 3563074..3563688(+) (comEA) [Bacillus velezensis strain BC248L1-1]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCTGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACCGCAGCCGATAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGGGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CAGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA	Latilactobacillus sakei subsp. sakei 23K	32.759	100	0.373
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae D39	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae R6	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363