Detailed information NTG1030339

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: AB6M97_RS03070
• Genome accession: NZ_CP163514
• Coordinates: 612511..613350 (+)
• Length: 279 a.a.
• NCBI ID: WP_121834971.1
• Uniprot ID: A0A3L9DV38
• Organism: Streptococcus hillyeri strain S23-3001-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 607511..618350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6M97_RS03045 (AB6M97_03045)	-	607635..608345 (+)	711	WP_121834967.1	ABC transporter ATP-binding protein	-
AB6M97_RS03050 (AB6M97_03050)	-	608900..610059 (+)	1160	Protein_582	ISAs1 family transposase	-
AB6M97_RS03055 (AB6M97_03055)	ylqF	610300..611151 (+)	852	WP_121834968.1	ribosome biogenesis GTPase YlqF	-
AB6M97_RS03060 (AB6M97_03060)	-	611138..611905 (+)	768	WP_121834969.1	ribonuclease HII	-
AB6M97_RS03065 (AB6M97_03065)	-	611907..612458 (+)	552	WP_121834970.1	sugar O-acetyltransferase	-
AB6M97_RS03070 (AB6M97_03070)	dprA	612511..613350 (+)	840	WP_121834971.1	DNA-processing protein DprA	Machinery gene
AB6M97_RS03075 (AB6M97_03075)	topA	613448..615571 (+)	2124	WP_369351080.1	type I DNA topoisomerase	-
AB6M97_RS03080 (AB6M97_03080)	-	615773..616352 (+)	580	Protein_588	recombinase family protein	-
AB6M97_RS03085 (AB6M97_03085)	-	616906..618072 (-)	1167	WP_369350352.1	IS30 family transposase	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31149.04 Da
• Isoelectric Point: 8.3597

>NTDB_id=1030339 AB6M97_RS03070 WP_121834971.1 612511..613350(+) (dprA) [Streptococcus hillyeri strain S23-3001-1]
MNNFDLYKLRKAGLTNLNILNILDYQKRVGKSLSLRDMAVVSQCKNPVLFIETFKNLNSKELREEFNRFPSLSILDKEYP
LELRNIYNPPALLFYQGNLDLLNKEKLGVVGSRKCSEVGTQSVDKLIKEMGNRFVIVSGLARGIDTSAHVAALKNGGATI
AVIGCGLDIYYPKENSKLQDYMARNQLVLTEYEVGQAPKKFHFPERNRIIAGLSRGIIVVEAKMRSGSLITCERAMEEGR
DIFAVPGNILDGKSDDCHHLIQEGAKCVTTGFDIISECV

Nucleotide

• Length: 840 bp

>NTDB_id=1030339 AB6M97_RS03070 WP_121834971.1 612511..613350(+) (dprA) [Streptococcus hillyeri strain S23-3001-1]
ATGAACAATTTTGACCTATATAAACTACGAAAAGCTGGGTTAACCAATCTTAATATTTTAAATATCCTAGACTATCAAAA
GCGTGTTGGAAAATCTCTATCTTTACGTGATATGGCAGTGGTTTCTCAATGTAAAAATCCTGTTCTATTTATCGAAACCT
TTAAAAATCTTAACAGCAAGGAACTACGTGAAGAGTTCAACCGTTTTCCTAGTCTTTCTATATTGGATAAGGAGTACCCT
CTGGAGCTGAGAAACATCTACAATCCCCCTGCTCTGCTATTTTACCAAGGAAACTTAGACCTTTTGAATAAGGAAAAATT
AGGTGTCGTTGGTTCCAGGAAGTGCTCAGAAGTTGGTACTCAGTCCGTAGATAAGCTGATCAAGGAAATGGGGAACCGTT
TTGTGATTGTCTCTGGTCTGGCGCGTGGGATTGACACTAGTGCTCATGTAGCTGCTTTGAAAAATGGCGGAGCGACGATT
GCAGTTATCGGCTGTGGTTTGGATATCTACTATCCTAAGGAAAATAGTAAATTACAGGATTACATGGCTAGAAATCAGCT
GGTGCTAACAGAATATGAGGTCGGTCAAGCACCAAAGAAATTCCATTTTCCAGAACGCAATCGGATTATAGCTGGCTTAT
CACGTGGGATTATCGTGGTGGAAGCAAAAATGCGTTCGGGAAGTTTGATTACTTGCGAACGAGCTATGGAAGAAGGACGT
GATATTTTTGCGGTTCCAGGTAACATTTTGGATGGAAAATCAGATGACTGTCATCATTTAATTCAAGAAGGCGCAAAGTG
CGTCACAACAGGTTTTGACATCATTTCTGAGTGTGTTTAG

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (72-269)

3D structure

• AlphaFold DB: A0A3L9DV38

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.202	99.283	0.717
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	61.372	99.283	0.609
dprA/cilB/dalA	Streptococcus pneumoniae D39	61.372	99.283	0.609
dprA/cilB/dalA	Streptococcus pneumoniae R6	61.372	99.283	0.609
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	61.372	99.283	0.609
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	61.011	99.283	0.606
dprA/cilB/dalA	Streptococcus mitis SK321	61.011	99.283	0.606
dprA	Lactococcus lactis subsp. cremoris KW2	58.123	99.283	0.577
dprA	Bacillus subtilis subsp. subtilis str. 168	43.2	89.606	0.387
dprA	Legionella pneumophila strain ERS1305867	37.193	100	0.38