Detailed information NTG1029457

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AB4670_RS01460
• Genome accession: NZ_CP163382
• Coordinates: 315427..316485 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain Y03
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 310427..321485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4670_RS01445 (AB4670_01445)	-	311534..311866 (+)	333	WP_000169602.1	hypothetical protein	-
AB4670_RS01450 (AB4670_01450)	-	311869..312693 (+)	825	WP_373658997.1	putative RNA methyltransferase	-
AB4670_RS01455 (AB4670_01455)	ponA	312711..315266 (-)	2556	WP_005109330.1	penicillin-binding protein PBP1a	-
AB4670_RS01460 (AB4670_01460)	pilM	315427..316485 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
AB4670_RS01465 (AB4670_01465)	pilN	316485..317126 (+)	642	WP_000201224.1	PilN domain-containing protein	Machinery gene
AB4670_RS01470 (AB4670_01470)	pilO	317123..317863 (+)	741	WP_000076099.1	type 4a pilus biogenesis protein PilO	Machinery gene
AB4670_RS01475 (AB4670_01475)	pilP	317874..318401 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
AB4670_RS01480 (AB4670_01480)	pilQ	318469..320634 (+)	2166	WP_272282496.1	type IV pilus secretin PilQ family protein	Machinery gene
AB4670_RS01485 (AB4670_01485)	aroK	320646..321215 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=1029457 AB4670_RS01460 WP_002014066.1 315427..316485(+) (pilM) [Acinetobacter baumannii strain Y03]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1029457 AB4670_RS01460 WP_002014066.1 315427..316485(+) (pilM) [Acinetobacter baumannii strain Y03]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAATGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCGGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCCTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACTATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423