Detailed information NTG1029401

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: AB4X21_RS01160
• Genome accession: NZ_CP163380
• Coordinates: 204275..204712 (+)
• Length: 145 a.a.
• NCBI ID: WP_369088027.1
• Uniprot ID: A0AB39LC99
• Organism: Streptococcus sp. CP1998
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 199275..209712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4X21_RS01125 (AB4X21_01125)	-	199618..200721 (+)	1104	WP_369088023.1	glycosyl hydrolase family 8	-
AB4X21_RS01130 (AB4X21_01130)	-	200943..201332 (+)	390	WP_037607163.1	DUF1033 family protein	-
AB4X21_RS01135 (AB4X21_01135)	comYA	201419..202360 (+)	942	WP_369088024.1	competence type IV pilus ATPase ComGA	Machinery gene
AB4X21_RS01140 (AB4X21_01140)	comGB/cglB	202293..203324 (+)	1032	WP_369088354.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB4X21_RS01145 (AB4X21_01145)	comYC	203321..203638 (+)	318	WP_369088025.1	competence type IV pilus major pilin ComGC	Machinery gene
AB4X21_RS01150 (AB4X21_01150)	comYD	203628..204032 (+)	405	WP_003004513.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB4X21_RS01155 (AB4X21_01155)	comGE	203998..204285 (+)	288	WP_369088026.1	competence type IV pilus minor pilin ComGE	-
AB4X21_RS01160 (AB4X21_01160)	comGF/cglF	204275..204712 (+)	438	WP_369088027.1	competence type IV pilus minor pilin ComGF	Machinery gene
AB4X21_RS01165 (AB4X21_01165)	comGG	204714..205151 (+)	438	WP_369088028.1	competence type IV pilus minor pilin ComGG	-
AB4X21_RS01170 (AB4X21_01170)	comYH	205182..206135 (+)	954	WP_369088029.1	class I SAM-dependent methyltransferase	Machinery gene
AB4X21_RS01175 (AB4X21_01175)	-	206187..207380 (+)	1194	WP_003004202.1	acetate kinase	-
AB4X21_RS01180 (AB4X21_01180)	-	207453..208184 (+)	732	WP_369088030.1	CPBP family intramembrane glutamic endopeptidase	-
AB4X21_RS01185 (AB4X21_01185)	folP	208347..209300 (+)	954	WP_369088031.1	dihydropteroate synthase	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16667.99 Da
• Isoelectric Point: 6.1352

>NTDB_id=1029401 AB4X21_RS01160 WP_369088027.1 204275..204712(+) (comGF/cglF) [Streptococcus sp. CP1998]
MWNNGKIKAFTLLEALVALSVLSGGVLVFQGLTKLLHAELGYQAHQKQEEWILFQQQLQVELDRSHFEKVENNHIYLVQD
QKPIAIGQSKGDDIRKTDDKGRGYQPMISGVHSSQIWQEGELIHLRLNFEDGLEREYVYHVVPAM

Nucleotide

• Length: 438 bp

>NTDB_id=1029401 AB4X21_RS01160 WP_369088027.1 204275..204712(+) (comGF/cglF) [Streptococcus sp. CP1998]
ATGTGGAATAACGGAAAGATCAAGGCTTTTACCCTGCTCGAAGCCTTAGTCGCTCTCTCGGTGCTCAGTGGGGGAGTGTT
GGTCTTTCAAGGCTTGACCAAGCTTCTGCATGCTGAATTGGGCTACCAGGCGCATCAAAAGCAGGAAGAATGGATACTTT
TTCAGCAACAATTGCAGGTGGAATTGGACCGGAGTCATTTTGAAAAAGTGGAGAACAACCATATCTACTTGGTTCAGGAT
CAAAAACCAATTGCCATTGGTCAATCTAAAGGAGATGATATCCGAAAAACAGATGATAAGGGCAGGGGCTATCAGCCTAT
GATTTCAGGGGTTCACTCTAGTCAGATTTGGCAGGAGGGAGAGTTGATTCATCTGCGGTTGAATTTTGAAGATGGTCTAG
AAAGGGAGTATGTCTACCATGTGGTACCAGCGATGTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (44-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	56.835	95.862	0.545
comGF/cglF	Streptococcus mitis SK321	54.676	95.862	0.524
comGF/cglF	Streptococcus pneumoniae Rx1	55.882	93.793	0.524
comGF/cglF	Streptococcus pneumoniae D39	55.882	93.793	0.524
comGF/cglF	Streptococcus pneumoniae R6	55.882	93.793	0.524
comGF/cglF	Streptococcus pneumoniae TIGR4	55.882	93.793	0.524
comYF	Streptococcus mutans UA159	42.963	93.103	0.4
comYF	Streptococcus mutans UA140	42.963	93.103	0.4
comGF	Lactococcus lactis subsp. cremoris KW2	38.849	95.862	0.372