Detailed information NTG1027769

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: AB4073_RS14910
• Genome accession: NZ_CP162643
• Coordinates: 3176019..3177137 (+)
• Length: 372 a.a.
• NCBI ID: WP_368677971.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain 128-92
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3171019..3182137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4073_RS14900 (AB4073_14900)	-	3174142..3174834 (-)	693	WP_031947571.1	YggS family pyridoxal phosphate-dependent enzyme	-
AB4073_RS14905 (AB4073_14905)	pilT	3174961..3175998 (+)	1038	WP_081175033.1	type IV pilus twitching motility protein PilT	Machinery gene
AB4073_RS14910 (AB4073_14910)	pilU	3176019..3177137 (+)	1119	WP_368677971.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
AB4073_RS14915 (AB4073_14915)	fur	3177207..3177644 (-)	438	WP_002121758.1	ferric iron uptake transcriptional regulator	-
AB4073_RS14920 (AB4073_14920)	-	3177756..3178154 (+)	399	WP_002121740.1	outer membrane protein assembly factor BamE	-
AB4073_RS14925 (AB4073_14925)	-	3178219..3178533 (-)	315	WP_016144536.1	RnfH family protein	-
AB4073_RS14930 (AB4073_14930)	-	3178533..3179600 (-)	1068	WP_099910029.1	hypothetical protein	-
AB4073_RS14935 (AB4073_14935)	-	3179754..3180209 (-)	456	WP_002121698.1	bacteriohemerythrin	-
AB4073_RS14940 (AB4073_14940)	-	3180461..3181309 (-)	849	WP_368677972.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41873.11 Da
• Isoelectric Point: 6.7811

>NTDB_id=1027769 AB4073_RS14910 WP_368677971.1 3176019..3177137(+) (pilU) [Acinetobacter lactucae strain 128-92]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAVTRECNFAIMNRDKSA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISYRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKSGQITYKDALKHADSPNDLRLTIKLAEEGPDQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=1027769 AB4073_RS14910 WP_368677971.1 3176019..3177137(+) (pilU) [Acinetobacter lactucae strain 128-92]
ATGGATTTTAATGACCTCCTCAACCTGATGGTTGAAAAAAAATCATCCGACCTCTTCATTACTGATGGCGTTGCACCATC
GATGAAGATTAACGGGCAAATTGTTCCCATTTCAAAAAATAGTCTTTCAGGCGAAATAATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAGCGCAAAGAATTTGCTGTGACTCGTGAATGTAACTTTGCTATTATGAACCGCGATAAAAGTGCG
CGCTTTCGTGTGAGTGCATTTCAGCAACGTGATATGCCGGGCATGGTACTACGTCGAATTGAAACTAAAATTCCTTCAAT
TGATGACTTGCAACTACCGCCTGTACTTAAAGATTTATCGATGACTAAACGCGGTATCATCATTTTTGTAGGTGCAACAG
GTACAGGTAAATCAACCTCACTAGCTTCAATGATTAGCTATCGGAACCATAATTCTAAAGGTCACATCATTACCATTGAA
GACCCTATCGAGTTTATTCATGAACACGCTGGCTGCATCATCACCCAACGTGAAGTCGGGATCGATACAGACTCATTCGA
AATTGCCTTAAAGAATACTTTGCGACAAGCGCCCGATGTAATCTTAATTGGTGAGATTCGTTCTCGTGAAGTCATGGACT
ACGCAATTGGCTTCGCCGAAACGGGTCACTTAGTATTAGCCACAATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCATTTCTTTGAAAGTGATCGTCACAGCCAGCTCTACATGGACTTATCTCTTAACTTAAAGGCCATGATTGCACA
GCAACTTATTCCCACTCCAGATGGTAATTCGCGCCGCGCCGCAATTGAGATTCTCATTAACTCACCATTAATTTCAGACT
ATATTCGTAAAGGCGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACCTTTGACCAA
GCGCTGTTTGATCTTTATAAGTCAGGCCAAATTACCTACAAAGATGCATTAAAACATGCTGACTCACCAAACGATTTGCG
TTTAACAATTAAGCTTGCTGAAGAAGGTCCTGATCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACAGACAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (41-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.132	100	0.763
pilU	Pseudomonas stutzeri DSM 10701	68.194	99.731	0.68
pilU	Vibrio cholerae strain A1552	54.324	99.462	0.54
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	40.659	97.849	0.398
pilT	Legionella pneumophila strain Lp02	39.645	90.86	0.36
pilT	Legionella pneumophila strain ERS1305867	39.645	90.86	0.36