Detailed information NTG1024778

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AB3L00_RS01660
• Genome accession: NZ_CP162300
• Coordinates: 352402..352884 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SIMBA113
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 347402..357884

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3L00_RS01650 (AB3L00_01650)	pilX	347705..348523 (+)	819	WP_000149378.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
AB3L00_RS01655 (AB3L00_01655)	pilY1	348535..352389 (+)	3855	WP_000768958.1	PilC/PilY family type IV pilus protein	Machinery gene
AB3L00_RS01660 (AB3L00_01660)	pilY2	352402..352884 (+)	483	WP_001046417.1	type IV pilin protein	Machinery gene
AB3L00_RS01665 (AB3L00_01665)	pilE	352881..353306 (+)	426	WP_000788346.1	type IV pilin protein	Machinery gene
AB3L00_RS01670 (AB3L00_01670)	rpsP	353453..353704 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
AB3L00_RS01675 (AB3L00_01675)	rimM	353724..354272 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
AB3L00_RS01680 (AB3L00_01680)	trmD	354318..355058 (+)	741	WP_368218187.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AB3L00_RS01685 (AB3L00_01685)	rplS	355266..355634 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
AB3L00_RS01690 (AB3L00_01690)	-	355686..356627 (-)	942	WP_085943440.1	triacylglycerol lipase	-
AB3L00_RS01695 (AB3L00_01695)	-	356742..357776 (-)	1035	WP_001189451.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=1024778 AB3L00_RS01660 WP_001046417.1 352402..352884(+) (pilY2) [Acinetobacter baumannii strain SIMBA113]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1024778 AB3L00_RS01660 WP_001046417.1 352402..352884(+) (pilY2) [Acinetobacter baumannii strain SIMBA113]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444