Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AB3L00_RS01665 | Genome accession | NZ_CP162300 |
| Coordinates | 352881..353306 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788346.1 | Uniprot ID | A0A0J8T367 |
| Organism | Acinetobacter baumannii strain SIMBA113 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 347881..358306
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3L00_RS01655 (AB3L00_01655) | pilY1 | 348535..352389 (+) | 3855 | WP_000768958.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AB3L00_RS01660 (AB3L00_01660) | pilY2 | 352402..352884 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| AB3L00_RS01665 (AB3L00_01665) | pilE | 352881..353306 (+) | 426 | WP_000788346.1 | type IV pilin protein | Machinery gene |
| AB3L00_RS01670 (AB3L00_01670) | rpsP | 353453..353704 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AB3L00_RS01675 (AB3L00_01675) | rimM | 353724..354272 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AB3L00_RS01680 (AB3L00_01680) | trmD | 354318..355058 (+) | 741 | WP_368218187.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AB3L00_RS01685 (AB3L00_01685) | rplS | 355266..355634 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AB3L00_RS01690 (AB3L00_01690) | - | 355686..356627 (-) | 942 | WP_085943440.1 | triacylglycerol lipase | - |
| AB3L00_RS01695 (AB3L00_01695) | - | 356742..357776 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15282.50 Da Isoelectric Point: 7.8144
>NTDB_id=1024779 AB3L00_RS01665 WP_000788346.1 352881..353306(+) (pilE) [Acinetobacter baumannii strain SIMBA113]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNTTIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNTTIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1024779 AB3L00_RS01665 WP_000788346.1 352881..353306(+) (pilE) [Acinetobacter baumannii strain SIMBA113]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCTTCAAATACAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCTTCAAATACAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
99.291 |
100 |
0.993 |
| comF | Acinetobacter baylyi ADP1 |
52.857 |
99.291 |
0.525 |