Detailed information NTG1024768

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AB3L00_RS01515
• Genome accession: NZ_CP162300
• Coordinates: 319239..320297 (+)
• Length: 352 a.a.
• NCBI ID: WP_031950501.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SIMBA113
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 314239..325297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3L00_RS01500 (AB3L00_01500)	-	315345..315677 (+)	333	WP_000169602.1	hypothetical protein	-
AB3L00_RS01505 (AB3L00_01505)	-	315680..316504 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
AB3L00_RS01510 (AB3L00_01510)	ponA	316522..319077 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
AB3L00_RS01515 (AB3L00_01515)	pilM	319239..320297 (+)	1059	WP_031950501.1	pilus assembly protein PilM	Machinery gene
AB3L00_RS01520 (AB3L00_01520)	pilN	320297..320938 (+)	642	WP_000201223.1	PilN domain-containing protein	Machinery gene
AB3L00_RS01525 (AB3L00_01525)	pilO	320935..321675 (+)	741	WP_000076102.1	type 4a pilus biogenesis protein PilO	Machinery gene
AB3L00_RS01530 (AB3L00_01530)	pilP	321686..322213 (+)	528	WP_368219325.1	pilus assembly protein PilP	Machinery gene
AB3L00_RS01535 (AB3L00_01535)	pilQ	322281..324446 (+)	2166	WP_001017031.1	type IV pilus secretin PilQ	Machinery gene
AB3L00_RS01540 (AB3L00_01540)	aroK	324458..325027 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39014.55 Da
• Isoelectric Point: 4.4618

>NTDB_id=1024768 AB3L00_RS01515 WP_031950501.1 319239..320297(+) (pilM) [Acinetobacter baumannii strain SIMBA113]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPIGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1024768 AB3L00_RS01515 WP_031950501.1 319239..320297(+) (pilM) [Acinetobacter baumannii strain SIMBA113]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATAGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGACGCGGTAGT
TCAGCAGGCGGCGCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCATTCTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423