Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | AB3L00_RS01530 | Genome accession | NZ_CP162300 |
| Coordinates | 321686..322213 (+) | Length | 175 a.a. |
| NCBI ID | WP_368219325.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain SIMBA113 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 316686..327213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3L00_RS01515 (AB3L00_01515) | pilM | 319239..320297 (+) | 1059 | WP_031950501.1 | pilus assembly protein PilM | Machinery gene |
| AB3L00_RS01520 (AB3L00_01520) | pilN | 320297..320938 (+) | 642 | WP_000201223.1 | PilN domain-containing protein | Machinery gene |
| AB3L00_RS01525 (AB3L00_01525) | pilO | 320935..321675 (+) | 741 | WP_000076102.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AB3L00_RS01530 (AB3L00_01530) | pilP | 321686..322213 (+) | 528 | WP_368219325.1 | pilus assembly protein PilP | Machinery gene |
| AB3L00_RS01535 (AB3L00_01535) | pilQ | 322281..324446 (+) | 2166 | WP_001017031.1 | type IV pilus secretin PilQ | Machinery gene |
| AB3L00_RS01540 (AB3L00_01540) | aroK | 324458..325027 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| AB3L00_RS01545 (AB3L00_01545) | aroB | 325056..326138 (+) | 1083 | WP_001193998.1 | 3-dehydroquinate synthase | - |
| AB3L00_RS01550 (AB3L00_01550) | - | 326154..327029 (+) | 876 | WP_000218804.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19477.67 Da Isoelectric Point: 8.4625
>NTDB_id=1024771 AB3L00_RS01530 WP_368219325.1 321686..322213(+) (pilP) [Acinetobacter baumannii strain SIMBA113]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVDNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVDNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=1024771 AB3L00_RS01530 WP_368219325.1 321686..322213(+) (pilP) [Acinetobacter baumannii strain SIMBA113]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCTGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCCCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGATAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCTGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCCCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGATAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
99.429 |
100 |
0.994 |
| comL | Acinetobacter baylyi ADP1 |
71.264 |
99.429 |
0.709 |