Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   AB1F57_RS00740 Genome accession   NZ_CP162268
Coordinates   126185..127978 (+) Length   597 a.a.
NCBI ID   WP_167785093.1    Uniprot ID   -
Organism   Streptococcus sp. ZY1909104     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 121185..132978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F57_RS00730 (AB1F57_00730) leuS 121971..124472 (+) 2502 WP_167785091.1 leucine--tRNA ligase -
  AB1F57_RS00735 (AB1F57_00735) pbp3 124721..125971 (-) 1251 WP_167785092.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  AB1F57_RS00740 (AB1F57_00740) oppA 126185..127978 (+) 1794 WP_167785093.1 oligopeptide ABC transporter substrate-binding protein Regulator
  AB1F57_RS00745 (AB1F57_00745) - 128190..129185 (+) 996 WP_167785094.1 ABC transporter ATP-binding protein -
  AB1F57_RS00750 (AB1F57_00750) - 129188..130129 (+) 942 WP_167785095.1 ATP-binding cassette domain-containing protein -
  AB1F57_RS00755 (AB1F57_00755) opp4B 130131..131087 (+) 957 WP_167785096.1 oligopeptide ABC transporter permease -
  AB1F57_RS00760 (AB1F57_00760) - 131102..132004 (+) 903 WP_167785097.1 ABC transporter permease -
  AB1F57_RS00765 (AB1F57_00765) tadA 132061..132570 (+) 510 WP_167785098.1 tRNA adenosine(34) deaminase TadA -

Sequence

Protein


Download         Length: 597 a.a.        Molecular weight: 65589.20 Da        Isoelectric Point: 4.4030

>NTDB_id=1024684 AB1F57_RS00740 WP_167785093.1 126185..127978(+) (oppA) [Streptococcus sp. ZY1909104]
MKKTTKLFALAGITLLSASVLAACGSKSSSSSQKQELSFPSEVKQDGSAVADAQLKYALVSATTSSGLLIDELTENNIDS
TFGGMVDISMFGYDGDRKLDDSGLAKAEFDVEGKKITVSLTGKDYKWSDGEPFTINDYIFTIKSMASKDYTGVRFDDKFL
NIVGMQEFVDGKASDISGIKKIDDYTVELTVKEMSPSMMYAGGDVPAYIQPEHIYKDIPVADWEKSEYSRTAKLVGMGPW
KIKEIVNGESITYVPNEHFFKGTTPKTSSFKIDIVSPDTIVSEMKAGNYDIADMPVDQLDSYKDASNLNIVGSLGSAYEY
ISFNLGKYDEAAGKNVMDENAKMNDVNLRQAIAYAIDTKTAGESLYNGLYHPANSLIISFFGDIHDSELEGYTYDPEKAK
KLLDEAGYKDVDGDGIREGKDGKEFKITFAARKRTEANEALVQQYIAWWKEVGLNVELYTGRTVEVNTFYDAIQANDASI
DMYAGGWSTGYDPNPTGTWGPIAAFNMSRFVSEENTKLLDAISSTASFDEKTNLENYKAWQKYAHEQAFAIPTFESESIT
ALNKRVKNYDSNYGSASGKGIALENIELTADKGVAAE

Nucleotide


Download         Length: 1794 bp        

>NTDB_id=1024684 AB1F57_RS00740 WP_167785093.1 126185..127978(+) (oppA) [Streptococcus sp. ZY1909104]
ATGAAAAAGACAACAAAACTCTTTGCTCTAGCAGGTATTACTCTTTTATCTGCATCTGTTTTGGCAGCTTGTGGCTCTAA
GTCATCTTCTAGCTCACAAAAACAAGAATTATCATTCCCGTCAGAAGTGAAACAAGATGGTTCAGCTGTTGCGGACGCAC
AATTGAAATACGCTTTGGTTTCAGCTACAACTTCATCAGGACTTTTGATCGATGAATTGACTGAAAATAATATTGATTCA
ACATTTGGTGGAATGGTTGATATTTCAATGTTTGGTTACGATGGAGATCGTAAATTAGATGACTCAGGTCTTGCTAAAGC
TGAATTTGATGTAGAAGGTAAAAAAATCACTGTTAGTTTGACAGGTAAAGATTACAAGTGGTCAGATGGTGAGCCATTTA
CTATTAATGATTACATCTTCACTATCAAGTCAATGGCAAGCAAAGACTATACAGGTGTTCGTTTTGATGATAAATTCTTG
AACATTGTGGGTATGCAAGAATTTGTTGACGGTAAAGCATCAGACATTTCAGGTATCAAGAAAATCGATGATTATACAGT
TGAACTGACTGTGAAAGAAATGTCACCTTCTATGATGTATGCCGGTGGTGATGTACCTGCCTATATCCAACCAGAACACA
TCTACAAAGACATCCCTGTAGCTGATTGGGAAAAGAGCGAGTATTCACGTACTGCTAAACTTGTAGGTATGGGACCTTGG
AAAATCAAGGAAATCGTAAACGGTGAGTCTATCACTTACGTTCCAAACGAACACTTCTTCAAGGGGACAACACCAAAAAC
AAGCTCATTCAAGATTGATATCGTGTCTCCTGATACTATCGTATCTGAAATGAAGGCTGGTAACTACGATATCGCAGATA
TGCCTGTTGACCAGTTGGATTCATATAAAGATGCTTCTAACTTGAATATCGTTGGATCTTTGGGTTCAGCTTACGAATAT
ATTTCATTCAACCTTGGTAAATATGACGAAGCTGCTGGTAAGAACGTTATGGATGAGAACGCTAAGATGAATGATGTGAA
TCTTCGCCAAGCGATTGCGTATGCGATTGATACGAAGACAGCTGGGGAATCACTCTATAATGGTCTATACCACCCAGCTA
ACTCATTGATTATCTCATTCTTCGGCGATATTCATGATTCTGAATTGGAAGGATACACATACGATCCAGAAAAAGCTAAA
AAACTCTTGGATGAAGCTGGCTACAAAGATGTAGATGGCGATGGTATCCGTGAAGGTAAAGATGGTAAGGAATTCAAGAT
TACCTTTGCTGCTCGTAAACGTACAGAAGCGAACGAAGCACTTGTACAACAATACATTGCTTGGTGGAAAGAAGTTGGCT
TGAATGTTGAATTGTACACTGGCCGTACTGTTGAAGTAAATACTTTCTACGATGCAATTCAAGCCAATGATGCTTCAATT
GATATGTATGCTGGTGGTTGGTCTACTGGTTACGATCCAAACCCAACAGGTACTTGGGGTCCTATCGCTGCCTTCAACAT
GTCACGTTTCGTATCTGAAGAAAATACGAAATTGTTGGATGCAATTAGTTCTACTGCTTCATTCGATGAGAAAACAAACC
TTGAAAACTATAAGGCTTGGCAAAAATACGCTCATGAGCAAGCATTTGCGATTCCAACATTTGAGTCTGAGTCAATTACT
GCGCTTAACAAACGCGTGAAAAACTATGATTCAAACTATGGTTCAGCTTCAGGTAAGGGTATTGCTCTTGAAAATATCGA
ATTGACTGCTGATAAAGGTGTCGCAGCTGAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(104-499)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

90.285

100

0.903

Multiple sequence alignment