Detailed information NTG1023407

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AB3G53_RS16540
• Genome accession: NZ_CP161999
• Coordinates: 3513281..3514339 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain SIMBA061
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3508281..3519339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3G53_RS16515 (AB3G53_16515)	aroK	3508551..3509120 (-)	570	WP_000643712.1	shikimate kinase AroK	-
AB3G53_RS16520 (AB3G53_16520)	pilQ	3509132..3511297 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
AB3G53_RS16525 (AB3G53_16525)	pilP	3511365..3511892 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
AB3G53_RS16530 (AB3G53_16530)	pilO	3511903..3512643 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
AB3G53_RS16535 (AB3G53_16535)	pilN	3512640..3513281 (-)	642	WP_000201223.1	PilN domain-containing protein	Machinery gene
AB3G53_RS16540 (AB3G53_16540)	pilM	3513281..3514339 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
AB3G53_RS16545 (AB3G53_16545)	ponA	3514501..3517056 (+)	2556	WP_057094660.1	penicillin-binding protein PBP1a	-
AB3G53_RS16550 (AB3G53_16550)	-	3517074..3517898 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
AB3G53_RS16555 (AB3G53_16555)	-	3517901..3518233 (-)	333	WP_057094662.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=1023407 AB3G53_RS16540 WP_002014066.1 3513281..3514339(-) (pilM) [Acinetobacter baumannii strain SIMBA061]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1023407 AB3G53_RS16540 WP_002014066.1 3513281..3514339(-) (pilM) [Acinetobacter baumannii strain SIMBA061]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423