Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ABZ559_RS00015 Genome accession   NZ_CP160400
Coordinates   2395..3606 (-) Length   403 a.a.
NCBI ID   WP_367006704.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1..8606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS00005 (ABZ559_00005) dnaA 1..1362 (-) 1362 WP_367006700.1 chromosomal replication initiator protein DnaA -
  ABZ559_RS00010 (ABZ559_00010) spo0J 1565..2335 (-) 771 WP_367006702.1 ParB/RepB/Spo0J family partition protein Regulator
  ABZ559_RS00015 (ABZ559_00015) htrA 2395..3606 (-) 1212 WP_367006704.1 trypsin-like peptidase domain-containing protein Regulator
  ABZ559_RS00020 (ABZ559_00020) rlmH 3818..4297 (+) 480 WP_273413279.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABZ559_RS00030 (ABZ559_00030) - 4898..5170 (-) 273 WP_018375142.1 Veg family protein -
  ABZ559_RS00035 (ABZ559_00035) dnaB 5208..6572 (-) 1365 WP_273413274.1 replicative DNA helicase -
  ABZ559_RS00040 (ABZ559_00040) rplI 6607..7059 (-) 453 WP_367006706.1 50S ribosomal protein L9 -

Sequence


Protein


Download         Length: 403 a.a.        Molecular weight: 42287.25 Da        Isoelectric Point: 4.4015

>NTDB_id=1020901 ABZ559_RS00015 WP_367006704.1 2395..3606(-) (htrA) [Streptococcus sp. ZY19097]
MKKMKNWLKPVAAVIILFLAGLTGALVALNITNKSQTTVSSSSNVTTSSVSYKNSTSTTEAVKKVQEAVVSVINYQSQSS
SLENNFSTQMFGDQSDSSSSDELSVYSEGSGVIYKIDGDSAYLVTNTHVIEGAKQIEIMLSDGTKVVGELVGEDTYSDIA
VVKISSKNISTVAEFADSDKLTVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTLTNSNGETISTNAIQTDAAINPGNS
GGALINVEGQVIGINSSKISSTSSQSGESVEGMGFAIPANDVVKIINQLEQNGEVVRPALGIRMAALSELSTNAISQLNI
PSSITNGVVVAKVIDGMPAQGKLEKYDVITEIDGKEVTSSSDLQSILYGHSINDSIKVTFYRGTEKKTTTIELTKTTKDL
SDE

Nucleotide


Download         Length: 1212 bp        

>NTDB_id=1020901 ABZ559_RS00015 WP_367006704.1 2395..3606(-) (htrA) [Streptococcus sp. ZY19097]
ATGAAAAAAATGAAAAATTGGCTGAAACCTGTTGCAGCTGTTATTATTTTATTCTTAGCAGGTCTAACAGGAGCTTTAGT
CGCTTTGAATATAACAAATAAGTCTCAAACAACTGTATCTAGCTCTTCTAATGTAACCACTAGTAGCGTTTCTTATAAAA
ACTCAACGAGTACTACAGAAGCCGTAAAAAAAGTGCAGGAGGCTGTCGTTTCGGTAATCAATTATCAATCACAAAGTAGT
TCACTCGAAAATAATTTTTCTACACAAATGTTCGGTGATCAATCTGATAGTTCTTCTTCAGATGAACTCAGTGTCTATAG
TGAAGGTTCTGGAGTTATCTATAAAATAGACGGTGACTCCGCTTACCTTGTCACAAACACACATGTTATTGAAGGTGCAA
AACAAATTGAAATTATGCTTTCAGACGGCACCAAAGTCGTCGGTGAGTTAGTTGGGGAAGATACCTATTCAGATATTGCA
GTCGTCAAAATTTCCTCAAAAAATATCTCAACAGTAGCAGAGTTTGCAGACTCTGATAAATTAACTGTAGGGGAAACTGC
TATTGCTATCGGTAGTCCGCTGGGTACCGAGTATGCAAATTCAGTAACACAAGGGATCGTATCCAGCCTAAGCCGTACTG
TAACACTCACAAATAGCAATGGTGAAACTATTTCAACTAATGCTATTCAAACAGATGCTGCCATCAATCCAGGAAATTCT
GGAGGTGCTCTTATCAATGTTGAAGGACAAGTCATTGGCATTAACTCAAGTAAAATTTCTTCTACTTCGAGCCAATCTGG
TGAATCTGTAGAAGGTATGGGCTTTGCAATCCCTGCAAACGATGTTGTAAAGATTATTAATCAACTTGAACAAAATGGAG
AAGTTGTACGTCCAGCATTAGGAATTCGAATGGCAGCACTCAGTGAACTCTCCACAAATGCTATCTCACAGCTGAATATT
CCTAGCAGTATTACAAATGGTGTCGTCGTTGCAAAAGTTATTGATGGTATGCCTGCTCAAGGAAAACTTGAAAAGTATGA
TGTCATTACTGAAATTGATGGCAAAGAAGTAACCTCCTCTTCAGATCTCCAAAGTATCCTTTATGGTCACTCTATTAATG
ATTCTATCAAAGTCACATTCTATCGTGGGACAGAGAAAAAAACAACAACGATTGAACTAACTAAGACAACCAAAGATTTA
TCTGATGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.232

98.511

0.633

  htrA Streptococcus gordonii str. Challis substr. CH1

58.435

100

0.593

  htrA Streptococcus mitis NCTC 12261

57.426

100

0.576

  htrA Streptococcus pneumoniae TIGR4

57.576

98.263

0.566

  htrA Streptococcus pneumoniae D39

57.576

98.263

0.566

  htrA Streptococcus pneumoniae Rx1

57.576

98.263

0.566

  htrA Streptococcus pneumoniae R6

57.576

98.263

0.566


Multiple sequence alignment