Detailed information NTG1020074

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AB0R77_RS16565
• Genome accession: NZ_CP160226
• Coordinates: 3184445..3185101 (-)
• Length: 218 a.a.
• NCBI ID: WP_235362365.1
• Uniprot ID: -
• Organism: Bacillus safensis strain JJ1244
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3179445..3190101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R77_RS16530 (AB0R77_16530)	fliW	3179582..3180016 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
AB0R77_RS16535 (AB0R77_16535)	-	3180045..3180623 (-)	579	WP_024426253.1	DUF6470 family protein	-
AB0R77_RS16540 (AB0R77_16540)	flgL	3180670..3181578 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
AB0R77_RS16545 (AB0R77_16545)	flgK	3181588..3183108 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
AB0R77_RS16550 (AB0R77_16550)	-	3183124..3183606 (-)	483	WP_024423619.1	flagellar protein FlgN	-
AB0R77_RS16555 (AB0R77_16555)	flgM	3183625..3183888 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
AB0R77_RS16560 (AB0R77_16560)	-	3183968..3184387 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
AB0R77_RS16565 (AB0R77_16565)	comFC	3184445..3185101 (-)	657	WP_235362365.1	ComF family protein	Machinery gene
AB0R77_RS16570 (AB0R77_16570)	-	3185128..3185421 (-)	294	WP_024423623.1	competence protein ComFB	-
AB0R77_RS16575 (AB0R77_16575)	comFA	3185470..3186867 (-)	1398	WP_152649307.1	DEAD/DEAH box helicase	Machinery gene
AB0R77_RS16580 (AB0R77_16580)	-	3186988..3187830 (-)	843	WP_024423625.1	DegV family protein	-
AB0R77_RS16585 (AB0R77_16585)	degU	3188046..3188735 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AB0R77_RS16590 (AB0R77_16590)	degS	3188800..3189975 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24882.01 Da
• Isoelectric Point: 10.0435

>NTDB_id=1020074 AB0R77_RS16565 WP_235362365.1 3184445..3185101(-) (comFC) [Bacillus safensis strain JJ1244]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNSWNERSNSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=1020074 AB0R77_RS16565 WP_235362365.1 3184445..3185101(-) (comFC) [Bacillus safensis strain JJ1244]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTAATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362