Detailed information NTG1020077

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R77_RS16590
• Genome accession: NZ_CP160226
• Coordinates: 3188800..3189975 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain JJ1244
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3183800..3194975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R77_RS16560 (AB0R77_16560)	-	3183968..3184387 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
AB0R77_RS16565 (AB0R77_16565)	comFC	3184445..3185101 (-)	657	WP_235362365.1	ComF family protein	Machinery gene
AB0R77_RS16570 (AB0R77_16570)	-	3185128..3185421 (-)	294	WP_024423623.1	competence protein ComFB	-
AB0R77_RS16575 (AB0R77_16575)	comFA	3185470..3186867 (-)	1398	WP_152649307.1	DEAD/DEAH box helicase	Machinery gene
AB0R77_RS16580 (AB0R77_16580)	-	3186988..3187830 (-)	843	WP_024423625.1	DegV family protein	-
AB0R77_RS16585 (AB0R77_16585)	degU	3188046..3188735 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AB0R77_RS16590 (AB0R77_16590)	degS	3188800..3189975 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AB0R77_RS16595 (AB0R77_16595)	-	3190196..3190864 (+)	669	WP_012011434.1	YigZ family protein	-
AB0R77_RS16600 (AB0R77_16600)	-	3190849..3191940 (+)	1092	WP_034281103.1	LCP family protein	-
AB0R77_RS16605 (AB0R77_16605)	-	3191976..3193043 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
AB0R77_RS16610 (AB0R77_16610)	-	3193178..3194374 (-)	1197	WP_025093964.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=1020077 AB0R77_RS16590 WP_003213166.1 3188800..3189975(-) (degS) [Bacillus safensis strain JJ1244]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1020077 AB0R77_RS16590 WP_003213166.1 3188800..3189975(-) (degS) [Bacillus safensis strain JJ1244]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAACTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCGCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGACTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTAAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841